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  • › Rn01511579_m1
See other TFEB GE Assays ›
Gene Symbol:
Tfeb
Gene Name:
transcription factor EB
Gene Aliases:
Tcfeb
Chromosome Location:
Chr.9: 15208141 - 15263966 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01511579_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tfeb
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001025707.1 NP_001020878.1 3 - 4 795 120
XM_006244440.2 XP_006244502.1 4 - 5 1724 120
XM_006244442.1 XP_006244504.1 4 - 5 714 120
XM_006244446.2 XP_006244508.1 4 - 5 1985 120
GenBank mRNA BC099102.1 - 3 - 4 795 7460021 120

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900001531.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tfeb

Gene Ontology Categories:

Function(s) Process(es)

embryonic placenta development
transcription from RNA polymerase II promoter
humoral immune response
lysosome organization
positive regulation of autophagy
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription regulatory region DNA binding
protein heterodimerization activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P975634 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 230001 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 877930 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 505219 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 233282 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P975634 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P975634 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P975634 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P157179 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P975634 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 90173 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10926289 - -
Affymetrix Rat Gene 1.0 ST Array 10926291 - -
Affymetrix Rat Gene 1.0 ST Array 10926292 - -
Affymetrix Rat Gene 1.0 ST Array 10926298 - -
Affymetrix Rat Gene 1.0 ST Array 10926296 - -
Affymetrix Rat Gene 1.0 ST Array 10926290 - -
Affymetrix Rat Gene 1.0 ST Array 10926295 - -
Affymetrix Rat Gene 1.0 ST Array 10926294 - -
Affymetrix Rat Gene 1.0 ST Array 10926293 - -
Affymetrix Rat Gene 1.0 ST Array 10926297 - -
Affymetrix Rat Gene 1.1 ST Array 10926288 - -
Rat Genome 230 2.0 Array 1373327_at - -
Rat Genome 230 2.0 Array 1373327_PM_at - -
Affymetrix HT Rat Focus Array 1373327_at - -
Affymetrix HT Rat Focus Array 1373327_PM_at - -
Affymetrix Rat Clariom S Assay PSR0900012711.rn.1 TC0900001531.rn.1 RTA TC
Rat Expression Set 230 1373327_at - -
Rat Expression Set 230 1373327_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10926288 - -
Rat Genome U34 Set rc_AI013379_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21554946 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1352113 - -

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