Itch
Genomic Map
Back To TopAssay Details
| Gene Symbol: Itch | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001005887.1 | NP_001005887.1 | 22 - 23 | 2467 | 85 | |
| XM_008762335.1 | XP_008760557.1 | 24 - 25 | 2695 | 85 | ||
| XM_008762336.1 | XP_008760558.1 | 24 - 25 | 2620 | 85 | ||
| XM_008762337.1 | XP_008760559.1 | 21 - 22 | 2372 | 85 | ||
| GenBank mRNA | AY600518.1 | - | 22 - 23 | 2467 | 85 | |
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Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0300002112.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
3' Most
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
protein polyubiquitination
positive regulation of T cell anergy
ubiquitin-dependent protein catabolic process
protein ubiquitination
negative regulation of NF-kappaB transcription factor activity
protein K29-linked ubiquitination
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
negative regulation of apoptotic process
positive regulation of protein catabolic process
negative regulation of JNK cascade
negative regulation of alpha-beta T cell proliferation
negative regulation of defense response to virus
protein K63-linked ubiquitination
protein K48-linked ubiquitination
regulation of protein deubiquitination
ubiquitin-protein transferase activity
protein binding
ligase activity
ribonucleoprotein complex binding
CXCR chemokine receptor binding
ubiquitin protein ligase activity
protein polyubiquitination
positive regulation of T cell anergy
ubiquitin-dependent protein catabolic process
protein ubiquitination
negative regulation of NF-kappaB transcription factor activity
protein K29-linked ubiquitination
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
negative regulation of apoptotic process
positive regulation of protein catabolic process
negative regulation of JNK cascade
negative regulation of alpha-beta T cell proliferation
negative regulation of defense response to virus
protein K63-linked ubiquitination
protein K48-linked ubiquitination
regulation of protein deubiquitination
ubiquitin-protein transferase activity
protein binding
ligase activity
ribonucleoprotein complex binding
CXCR chemokine receptor binding
ubiquitin protein ligase activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P006408 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 361461 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 637971 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 222886 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 628983 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 186576 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 350741 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 154487 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 648882 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 129416 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 502622 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 85962 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 752484 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 905551 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 759947 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 43413 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 492762 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 168065 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 136422 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 153611 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 261060 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 896032 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 505943 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 797771 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 554017 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 158754 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 319362 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 379225 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 465512 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 610790 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 903548 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 434429 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 833718 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 33576 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 498568 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 185216 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 915980 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 870619 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 230962 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 875249 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 625086 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 609614 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 239809 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 569714 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 387091 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 546520 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 183870 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 140194 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 155068 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 151369 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 87997 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 1935 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 96479 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 64913 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P006408 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P006408 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P006408 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 51021 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 20571 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 35656 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 20897 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 46923 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10841313 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841324 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841309 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841316 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841325 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841318 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841307 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841326 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841320 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841312 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841314 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841323 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841319 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841310 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841311 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841308 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841315 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841317 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841321 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841304 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841306 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841305 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10841301 | - | - |
| Affymetrix Rat Clariom S Assay | PSR0300015442.rn.1 | TC0300002112.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0300015441.rn.1 | TC0300002112.rn.1 | RTA TC |
| Affymetrix Rat Gene 1.0 ST Array | 10841301 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21630697 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1373173 | - | - |
| RatRef-12 Expression BeadChip | ILMN_68906 | - | - |
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