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See other ZEB1 GE Assays ›
Gene Symbol:
Zeb1
Gene Name:
zinc finger E-box binding homeobox 1
Gene Aliases:
Tcf8, Zfhx1a, deltaEF1
Chromosome Location:
Chr.17: 54658463 - 54678819 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01538408_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Zeb1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_013164.1 NP_037296.1 7 - 8 2458 106
GenBank mRNA AY325179.1 - 7 - 8 2458 106
U51583.1 - 2705 106

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1700001940.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Zeb1

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
pattern specification process
central nervous system development
negative regulation of cell proliferation
regulation of mesenchymal cell proliferation
response to activity
regulation of transforming growth factor beta receptor signaling pathway
negative regulation of epithelial cell differentiation
forebrain development
response to nutrient levels
regulation of T cell differentiation in thymus
positive regulation of neuron differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
animal organ development
embryonic camera-type eye morphogenesis
embryonic morphogenesis
embryonic skeletal system morphogenesis
semicircular canal morphogenesis
regulation of smooth muscle cell differentiation
cartilage development
cellular response to amino acid stimulus
cellular response to transforming growth factor beta stimulus
cochlea morphogenesis
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
chromatin binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
transcription factor binding
zinc ion binding
sequence-specific DNA binding
metal ion binding
E-box binding

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P153979 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 863732 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 724403 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 443662 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 551951 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 673785 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 619972 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 714585 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 248167 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 538484 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 639497 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 966797 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 215698 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 604904 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 140080 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 46325 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 113932 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P153979 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P153979 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P153979 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P153979 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P688802 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700528056 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 26969 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 64268 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 48380 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 30771 - -
Agilent Rat cDNA Microarray (G4105A) 700528056 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10798785 - -
Affymetrix Rat Gene 1.0 ST Array 10798783 - -
Affymetrix Rat Gene 1.0 ST Array 10798787 - -
Affymetrix Rat Gene 1.0 ST Array 10798782 - -
Affymetrix Rat Gene 1.0 ST Array 10798781 - -
Affymetrix Rat Gene 1.0 ST Array 10798786 - -
Affymetrix Rat Gene 1.0 ST Array 10798784 - -
Affymetrix Rat Gene 1.0 ST Array 10798789 - -
Affymetrix Rat Gene 1.1 ST Array 10798780 - -
Rat Genome 230 2.0 Array 1380200_at - -
Rat Genome 230 2.0 Array 1370965_PM_at - -
Rat Genome 230 2.0 Array 1370965_at - -
Rat Genome 230 2.0 Array 1380200_PM_at - -
Rat Genome 230 2.0 Array 1376673_PM_at - -
Rat Genome 230 2.0 Array 1376673_at - -
Affymetrix HT Rat Focus Array 1370965_PM_at - -
Affymetrix HT Rat Focus Array 1370965_at - -
Affymetrix Rat Clariom S Assay PSR1700013104.rn.1 TC1700001940.rn.1 RTA TC
Rat Expression Set 230 1370965_at - -
Rat Expression Set 230 1370965_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10798780 - -
Rat Genome U34 Set U51583_at - -
Rat Genome U34 Set U51584_s_at - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1374962 - -

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