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See other MYD88 GE Assays ›
Gene Symbol:
Myd88
Gene Name:
myeloid differentiation primary response 88
Gene Aliases:
-
Chromosome Location:
Chr.8: 128022512 - 128027461 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01640049_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Myd88
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_198130.1 NP_937763.1 1 - 2 416 88
XM_006244087.2 XP_006244149.1 2 - 3 763 88
GenBank mRNA AY191270.1 - 1 - 2 416 88
BC097266.1 - 1 - 2 356 7459961 88

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800003545.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Myd88

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)

response to molecule of fungal origin
MyD88-dependent toll-like receptor signaling pathway
inflammatory response
cell surface receptor signaling pathway
JNK cascade
Toll signaling pathway
response to virus
immunoglobulin mediated immune response
cytokine-mediated signaling pathway
lipopolysaccharide-mediated signaling pathway
response to peptidoglycan
response to lipopolysaccharide
positive regulation of interleukin-17 production
positive regulation of interleukin-23 production
positive regulation of interleukin-6 production
positive regulation of tumor necrosis factor production
regulation of cell proliferation
positive regulation of I-kappaB kinase/NF-kappaB signaling
negative regulation of growth of symbiont in host
positive regulation of chemokine biosynthetic process
innate immune response
type I interferon biosynthetic process
positive regulation of JNK cascade
positive regulation of smooth muscle cell proliferation
positive regulation of lymphocyte proliferation
regulation of inflammatory response
defense response to Gram-positive bacterium
positive regulation of NF-kappaB transcription factor activity
response to interleukin-1
3'-UTR-mediated mRNA stabilization
cellular response to mechanical stimulus
establishment of endothelial intestinal barrier
receptor binding
Toll binding
interleukin-1 receptor binding
protein binding
identical protein binding
TIR domain binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR0800028843.rn.1 TC0800003545.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0800028841.rn.1 TC0800003545.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0800028842.rn.1 TC0800003545.rn.1 RTA TC

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