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See other PPA1 GE Assays ›
Gene Symbol:
Ppa1
Gene Name:
pyrophosphatase (inorganic) 1
Gene Aliases:
Pp, Pyp
Chromosome Location:
Chr.20: 31265519 - 31292451 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn02109307_u1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Ppa1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001100834.1 NP_001094304.1 2 240 142
GenBank mRNA BC099794.1 - 2 240 142
FQ215196.1 - 2 192 142
FQ215675.1 - 2 192 142

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000685.rn.1

Set Membership:

Amplicon length greater than or equal to 101 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Amplicon spans exons and probe does not span exons

Panther Classification:

Molecular Function -

pyrophosphatase

Gene Ontology Categories:

Function(s) Process(es)

phosphate-containing compound metabolic process
magnesium ion binding
inorganic diphosphatase activity
pyrophosphatase activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P548520 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 590279 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 207361 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 621576 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 844302 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 887454 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 638030 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 860066 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 306072 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 199639 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 497580 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 880173 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 263962 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 300856 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 45249 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 543321 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 145724 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 201371 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 437129 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 909115 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 226965 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 118216 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 50527 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 17756 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 119596 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P548520 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P548520 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P548520 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P548520 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 27736 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 73304 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10830045 - -
Affymetrix Rat Gene 1.0 ST Array 10830048 - -
Affymetrix Rat Gene 1.0 ST Array 10830043 - -
Affymetrix Rat Gene 1.0 ST Array 10830044 - -
Affymetrix Rat Gene 1.0 ST Array 10830041 - -
Affymetrix Rat Gene 1.0 ST Array 10830046 - -
Affymetrix Rat Gene 1.0 ST Array 10830042 - -
Affymetrix Rat Gene 1.0 ST Array 10830047 - -
Affymetrix Rat Gene 1.0 ST Array 10830040 - -
Affymetrix Rat Gene 1.0 ST Array 10830039 - -
Affymetrix Rat Gene 1.0 ST Array 10830049 - -
Affymetrix Rat Gene 1.1 ST Array 10830038 - -
Rat Genome 230 2.0 Array 1388960_PM_at - -
Rat Genome 230 2.0 Array 1388960_at - -
Affymetrix HT Rat Focus Array 1388960_at - -
Affymetrix HT Rat Focus Array 1388960_PM_at - -
Affymetrix Rat Clariom S Assay PSR2000006002.rn.1 TC2000000685.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006006.rn.1 TC2000000685.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006011.rn.1 TC2000000685.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006008.rn.1 TC2000000685.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006013.rn.1 TC2000000685.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006009.rn.1 TC2000000685.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006014.rn.1 TC2000000685.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006003.rn.1 TC2000000685.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006005.rn.1 TC2000000685.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006012.rn.1 TC2000000685.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000006007.rn.1 TC2000000685.rn.1 RTA TC
Rat Expression Set 230 1388960_at - -
Rat Expression Set 230 1388960_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10830038 - -
Rat Genome U34 Set rc_AA965166_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21876191 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1370202 - -

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