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See other SUB1 GE Assays ›
Gene Symbol:
Sub1
Gene Name:
SUB1 homolog (S. cerevisiae)
Gene Aliases:
Rpo2tc1
Chromosome Location:
Chr.2: 62019902 - 62034702 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn02347054_g1
Best Coverage
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Sub1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001009618.1 NP_001009618.1 3 - 4 310 112
XM_006232043.2 XP_006232105.1 3 - 4 277 112
GenBank mRNA BC088346.1 - 3 - 4 310 7368325 112
FQ211681.1 - 3 - 4 267 112
FQ211748.1 - 3 - 4 267 112
FQ230867.1 - 3 - 4 240 112
FQ232387.1 - 3 - 4 239 112

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sub1

Panther Classification:

Molecular Function -

general transcription factor

Gene Ontology Categories:

Function(s) Process(es)

transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
biological_process
positive regulation of transcription from RNA polymerase II promoter
SMAD protein signal transduction
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding
molecular_function
single-stranded DNA binding
transcription coactivator activity
poly(A) RNA binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P1026398 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 689935 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 199160 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 25313 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 281655 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 526686 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 943789 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 287694 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 620501 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 941428 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 78070 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1026398 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1026398 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P1026398 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P1026398 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 702031465 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 68422 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 59875 - -
Agilent Rat cDNA Microarray (G4105A) 702031465 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10822001 - -
Affymetrix Rat Gene 1.0 ST Array 10822003 - -
Affymetrix Rat Gene 1.0 ST Array 10822002 - -
Affymetrix Rat Gene 1.0 ST Array 10822004 - -
Affymetrix Rat Gene 1.1 ST Array 10822000 - -
Rat Genome 230 2.0 Array 1398880_PM_at - -
Rat Genome 230 2.0 Array 1398880_at - -
Affymetrix HT Rat Focus Array 1398880_PM_at - -
Affymetrix HT Rat Focus Array 1398880_at - -
Affymetrix Rat Clariom S Assay PSR0200021634.rn.1 TC0200003086.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0200021635.rn.1 TC0200003086.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0200021640.rn.1 TC0200003086.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0200021633.rn.1 TC0200003086.rn.1 RTA TC
Rat Expression Set 230 1398880_PM_at - -
Rat Expression Set 230 1398880_at - -
Affymetrix Rat Gene 1.0 ST Array 10822000 - -
Rat Genome U34 Set K02816_g_at - -
Rat Genome U34 Set K02816_at - -
Rat Genome U34 Set rc_AA955197_i_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 20805519 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1357572 - -
RatRef-12 Expression BeadChip ILMN_48474 - -

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