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See other PJA1 GE Assays ›
Gene Symbol:
Pja1
Gene Name:
praja ring finger 1, E3 ubiquitin protein ligase
Gene Aliases:
-
Chromosome Location:
Chr.X: 69213645 - 69218834 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn04224305_u1
Best Coverage
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Pja1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001101006.1 NP_001094476.1 3 653 76
XM_006257105.2 XP_006257167.1 2 1767 76
XM_006257106.2 XP_006257168.1 2 1484 76
XM_006257107.2 XP_006257169.1 3 1227 76
GenBank mRNA BC081885.1 - 3 653 7108525 76

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)

protein ubiquitination
protein catabolic process
ubiquitin-protein transferase activity
zinc ion binding
ubiquitin protein ligase activity

MicroArray Probes:

Agilent Affymetrix ABI

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P517317 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P517317 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P517317 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P517317 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P517317 - -
Array Name Probe IDs Targets Target Type
Rat Genome 230 2.0 Array 1371956_at - -
Rat Genome 230 2.0 Array 1371956_PM_at - -
Affymetrix HT Rat Focus Array 1371956_PM_at - -
Affymetrix HT Rat Focus Array 1371956_at - -
Affymetrix Rat Clariom S Assay PSR0X00012159.rn.1 TC0X00001927.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0X00012161.rn.1 TC0X00001927.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0X00012163.rn.1 TC0X00001927.rn.1 RTA TC
Rat Expression Set 230 1371956_PM_at - -
Rat Expression Set 230 1371956_at - -
Rat Genome U34 Set rc_AA925150_at - -
Rat Genome U34 Set rc_AA925150_g_at - -
Rat Genome U34 Set rc_AA957660_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21781230 - -

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