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See other TNFRSF11A GE Assays ›
Gene Symbol:
Tnfrsf11a
Gene Name:
tumor necrosis factor receptor superfamily, member 11a, NFKB activator
Gene Aliases:
RANK, RGD1563614
Chromosome Location:
Chr.13: 25778306 - 25835802 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn04340164_m1
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tnfrsf11a
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001271235.1 NP_001258164.1 9 - 10 1566 63
XM_008769487.1 XP_008767709.1 9 - 10 1544 63

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300000070.rn.1

Set Membership:

Amplicon length less than or equal to 70 Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Function(s) Process(es)

ossification
adaptive immune response
multicellular organism development
response to radiation
programmed cell death
osteoclast differentiation
response to lipopolysaccharide
tumor necrosis factor-mediated signaling pathway
response to cytokine
response to tumor necrosis factor
positive regulation of JUN kinase activity
lymph node development
positive regulation of sequence-specific DNA binding transcription factor activity
positive regulation of NF-kappaB transcription factor activity
circadian temperature homeostasis
mammary gland alveolus development
response to interleukin-1
positive regulation of fever generation by positive regulation of prostaglandin secretion
TNFSF11-mediated signaling pathway
positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signaling
molecular_function
transmembrane signaling receptor activity
tumor necrosis factor-activated receptor activity
cytokine binding

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P069421 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P069419 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P069419 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P069419 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10763269 - -
Rat Genome 230 2.0 Array 1394313_PM_at - -
Rat Genome 230 2.0 Array 1394313_at - -
Affymetrix Rat Clariom S Assay PSR1300000299.rn.1 TC1300000070.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1300000298.rn.1 TC1300000070.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1300000300.rn.1 TC1300000070.rn.1 RTA TC
Rat Expression Set 230 1394313_at - -
Rat Expression Set 230 1394313_PM_at - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1352887 - -
RatRef-12 Expression BeadChip ILMN_48811 - -

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