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See other SOX18 CNV Assays ›
Gene Symbol
SOX18
Assay Reference Genome
Location

Chr.20:64048229 on build GRCh38
Cytoband
20q13.33
Assay ID Hs00106858_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 54345

Gene Name:

 SRY-box 18

Gene Aliases:

 HLTRS, HLTS

Location:

 Chr.20:64047726-64049626 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SOX18 NM_018419.2 2 1202 NP_060889.1
AB033888.1 2 1237 BAA94874.1
AF270652.1 2 1214 AAG48577.1
AJ243896.1 2 1104 CAB95835.1
BC038590.1 2 1204 AAH38590.1
BC073971.1 2 1204 AAH73971.1
BC111390.1 2 1202

Target Gene Details

Entrez Gene ID:

 6919

Gene Name:

 transcription elongation factor A2

Gene Aliases:

 TFIIS

Location:

 Chr.20:64042350-64072347 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TCEA2 XM_011529022.1 XP_011527324.1
XM_011529027.2 XP_011527329.1
XM_017028036.1 XP_016883525.1
XM_017028037.1 XP_016883526.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv586727 Chr.20:64048243 - 64052630 on Build GRCh38 Gain SOX18 TCEA2
nsv470564 Chr.20:64027492 - 64169828 on Build GRCh38 Gain RGS19 SOX18 LINC00176 LKAAEAR1 TCEA2 MYT1 OPRL1 MIR6813 NPBWR2 PRPF6
nsv586703 Chr.20:63964886 - 64095388 on Build GRCh38 Loss RGS19 SOX18 ZNF512B LINC00176 SAMD10 LKAAEAR1 TCEA2 OPRL1 MIR6813 PRPF6
nsv586726 Chr.20:64048115 - 64049803 on Build GRCh38 Gain+Loss SOX18 TCEA2
nsv509785 Chr.20:63999103 - 64137376 on Build GRCh38 Insertion RGS19 SOX18 LINC00176 LKAAEAR1 TCEA2 OPRL1 MIR6813 NPBWR2 PRPF6
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss RGS19 PCMTD2 TNFRSF6B ZGPAT UCKL1-AS1 LINC00266-1 MIR941-5 MYT1 RTEL1 C20orf181 MIR6813 NPBWR2 MIR941-3 ZBTB46 DNAJC5 UCKL1 LIME1 PRPF6 MIR647 MIR941-1 MIR941-4 SOX18 SLC2A4RG SAMD10 GMEB2 ARFRP1 STMN3 ZNF512B MIR1914 LINC00176 LKAAEAR1 LOC100505771 TCEA2 ABHD16B RTEL1-TNFRSF6B OPRL1 MIR941-2 TPD52L2 ZBTB46-AS1
esv22562 Chr.20:64048087 - 64049968 on Build GRCh38 Loss SOX18 TCEA2
nsv953310 Chr.20:64017648 - 64160147 on Build GRCh38 Deletion RGS19 SOX18 LINC00176 LKAAEAR1 TCEA2 OPRL1 MIR6813 NPBWR2 PRPF6
nsv1160691 Chr.20:63943650 - 64055199 on Build GRCh38 Deletion SOX18 ZNF512B LINC00176 SAMD10 TCEA2 UCKL1-AS1 UCKL1 PRPF6
dgv7699n54 Chr.20:64036665 - 64048700 on Build GRCh38 Loss SOX18 LINC00176 TCEA2
esv2758807 Chr.20:64006869 - 64334167 on Build GRCh38 Gain+Loss RGS19 SOX18 PCMTD2 LINC00176 LKAAEAR1 TCEA2 LINC00266-1 MYT1 OPRL1 MIR6813 NPBWR2 PRPF6
nsv586720 Chr.20:64047196 - 64048926 on Build GRCh38 Loss SOX18 TCEA2

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