Name: [Hs00127187_cn] [CDKN1C]
Creator: Thermo Fisher Scientific
Keywords: [CDKN1C] Assay, [cyclin dependent kinase inhibitor 1C] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	1028
Gene Name:	cyclin dependent kinase inhibitor 1C
Gene Aliases:	BWCR, BWS, KIP2, WBS, p57, p57Kip2
Location:	Chr.11:2883218-2885804 on Build GRCh38
Assay Gene Location:	Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CDKN1C	NM_000076.2	3	1422	NP_000067.1
	NM_001122630.1	4	1255	NP_001116102.1
	NM_001122631.1	4	1250	NP_001116103.1
	XM_005252732.4	4	757	XP_005252789.1
	XM_017017088.1	3	1279	XP_016872577.1
	BC067842.1	3	1426	AAH67842.1
	BM673714.1	1	159
	CD676249.1
	EU570054.1	4	1278
	U22398.1	3	1406	AAA85095.1

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv825715	Chr.11:2855771 - 2890367 on Build GRCh38	Gain	SLC22A18AS CDKN1C KCNQ1-AS1 KCNQ1DN
nsv951292	Chr.11:2792271 - 2927870 on Build GRCh38	Deletion	SLC22A18 SLC22A18AS CDKN1C KCNQ1-AS1 KCNQ1DN KCNQ1
esv2759795	Chr.11:2767814 - 2942382 on Build GRCh38	Gain	PHLDA2 SLC22A18 SLC22A18AS CDKN1C KCNQ1-AS1 KCNQ1DN KCNQ1
dgv1576n54	Chr.11:2877519 - 2891323 on Build GRCh38	Loss	SLC22A18AS CDKN1C
dgv1575n54	Chr.11:2863338 - 2899436 on Build GRCh38	Loss	SLC22A18AS CDKN1C KCNQ1DN
nsv469930	Chr.11:2831299 - 2924715 on Build GRCh38	Loss	SLC22A18 SLC22A18AS CDKN1C KCNQ1-AS1 KCNQ1DN KCNQ1
nsv832050	Chr.11:2868540 - 2963987 on Build GRCh38	Loss	PHLDA2 SLC22A18 SLC22A18AS NAP1L4 CDKN1C SNORA54 KCNQ1DN
nsv467655	Chr.11:2864498 - 2891716 on Build GRCh38	Loss	SLC22A18AS CDKN1C KCNQ1DN
nsv553111	Chr.11:2842057 - 2904391 on Build GRCh38	Loss	SLC22A18 SLC22A18AS CDKN1C KCNQ1-AS1 KCNQ1DN KCNQ1
nsv467657	Chr.11:2879188 - 2916401 on Build GRCh38	Loss	SLC22A18 SLC22A18AS CDKN1C
dgv1574n54	Chr.11:2848935 - 2889391 on Build GRCh38	Loss	SLC22A18AS CDKN1C KCNQ1-AS1 KCNQ1DN KCNQ1