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See other FAM3A CNV Assays ›
Gene Symbol
FAM3A
Assay Reference Genome
Location

Chr.X:154507339 on build GRCh38
Cytoband
Xq28
Assay ID Hs00141722_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 60343

Gene Name:

 family with sequence similarity 3 member A

Gene Aliases:

 2.19, DLD, DXS560S, XAP-7

Location:

 Chr.X:154506159-154516249 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAM3A NM_001171132.2 NP_001164603.1
NM_001171133.2 NP_001164604.1
NM_001171134.2 NP_001164605.1
NM_001282311.1 NP_001269240.1
NM_001282312.1 NP_001269241.1
NM_021806.3 NP_068578.2
XM_005274714.3 XP_005274771.1
XM_005274716.3 XP_005274773.1
XM_005277879.4 XP_005277936.1
XM_006724831.2 XP_006724894.1
XM_006724832.3 XP_006724895.1
XM_006724833.2 XP_006724896.1
XM_006724834.2 XP_006724897.1
XM_011531185.2 XP_011529487.1
XM_017029699.1 XP_016885188.1
XM_017029700.1 XP_016885189.1
XM_017029701.1 XP_016885190.1
XM_017029702.1 XP_016885191.1
AK024601.1
AK057945.1
AK124890.1
AK294116.1
AK314682.1
BC002934.1 AAH02934.1
BC008912.2 AAH08912.1
BM457676.1
CX867071.1
X87193.1 CAA60645.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33784 Chr.X:153962665 - 155699588 on Build GRCh38 Gain+Loss CH17-340M24.3 SLC10A3 SNORA56 OPN1MW3 LOC105373386 FAM3A RPL10 MIR3202-2 IKBKG FAM223A IRAK1 G6PD MIR3202-1 MIR718 TMLHE-AS1 SMIM9 VBP1 CTAG1A LOC107987332 LOC101927830 FAM223B ATP6AP1 F8 FUNDC2 H2AFB2 RAB39B MIR1184-2 DKC1 MECP2 CLIC2 TMEM187 PLXNA3 OPN1MW2 MTCP1 MPP1 BRCC3 GAB3 SNORA36A TEX28 EMD FAM50A OPN1MW SNORA70 LAGE3 F8A1 GDI1 H2AFB3 H2AFB1 MIR1184-1 MIR664B OPN1LW TMLHE UBL4A TKTL1 HCFC1 FLNA SPRY3 MIR1184-3 CTAG2 HCFC1-AS1 F8A2 F8A3 CTAG1B TAZ MIR6858 CMC4 DNASE1L1
nsv519042 Chr.X:154082978 - 154601444 on Build GRCh38 Gain CH17-340M24.3 SLC10A3 TEX28 OPN1MW3 EMD FAM50A LOC105373386 OPN1MW FAM3A SNORA70 LAGE3 RPL10 GDI1 IKBKG FAM223A G6PD OPN1LW CTAG1A LOC107987332 UBL4A TKTL1 ATP6AP1 FLNA MECP2 TAZ PLXNA3 MIR6858 DNASE1L1 OPN1MW2
esv33199 Chr.X:153065734 - 154591978 on Build GRCh38 Gain+Loss CH17-340M24.3 SLC10A3 PLXNB3 RENBP OPN1MW3 LOC105373386 FAM3A DUSP9 RPL10 MIR3202-2 IKBKG FAM223A ZNF275 IRAK1 G6PD MIR3202-1 LOC105373378 MIR718 MAGEA1 LOC107983954 IDH3G TREX2 CTAG1A LOC107987332 AVPR2 ATP6AP1 LCA10 FAM58A ZFP92 MECP2 ABCD1 LOC105373377 BGN TMEM187 PLXNA3 OPN1MW2 HAUS7 PDZD4 PNMA6A LOC105373383 TEX28 EMD FAM50A PNCK OPN1MW SNORA70 LAGE3 GDI1 L1CAM ARHGAP4 NAA10 OPN1LW UBL4A TKTL1 BCAP31 LOC105373381 ATP2B3 HCFC1 FLNA SLC6A8 HCFC1-AS1 SRPK3 TAZ SSR4 MIR6858 DNASE1L1
nsv508816 Chr.X:154492171 - 154591783 on Build GRCh38 Insertion CTAG1A IKBKG FAM223A G6PD FAM3A

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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