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See other FAM3A CNV Assays ›
Gene Symbol
FAM3A
Assay Reference Genome
Location

Chr.X:154507339 on build GRCh38
Cytoband
Xq28
Assay ID Hs00141722_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 60343

Gene Name:

 family with sequence similarity 3 member A

Gene Aliases:

 2.19, DLD, DXS560S, XAP-7

Location:

 Chr.X:154506159-154516249 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAM3A NM_001171132.2 NP_001164603.1
NM_001171133.2 NP_001164604.1
NM_001171134.2 NP_001164605.1
NM_001282311.1 NP_001269240.1
NM_001282312.1 NP_001269241.1
NM_021806.3 NP_068578.2
XM_005274714.3 XP_005274771.1
XM_005274716.3 XP_005274773.1
XM_005277879.4 XP_005277936.1
XM_006724831.2 XP_006724894.1
XM_006724832.3 XP_006724895.1
XM_006724833.2 XP_006724896.1
XM_006724834.2 XP_006724897.1
XM_011531185.2 XP_011529487.1
XM_017029699.1 XP_016885188.1
XM_017029700.1 XP_016885189.1
XM_017029701.1 XP_016885190.1
XM_017029702.1 XP_016885191.1
AK024601.1
AK057945.1
AK124890.1
AK294116.1
AK314682.1
BC002934.1 AAH02934.1
BC008912.2 AAH08912.1
BM457676.1
CX867071.1
X87193.1 CAA60645.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33784 Chr.X:153962665 - 155699588 on Build GRCh38 Gain+Loss MIR1184-1 TMLHE BRCC3 LOC101927830 H2AFB2 SNORA36A SLC10A3 MECP2 F8A1 PLXNA3 F8 H2AFB1 VBP1 HCFC1-AS1 FAM223B OPN1MW3 CTAG2 MPP1 DNASE1L1 TKTL1 CMC4 LOC107987332 UBL4A ATP6AP1 HCFC1 MIR3202-1 EMD FAM223A RPL10 OPN1LW LOC105373386 CH17-340M24.3 TEX28 TMEM187 F8A3 RAB39B OPN1MW2 F8A2 H2AFB3 FUNDC2 MIR3202-2 SNORA56 FAM3A GAB3 FLNA DKC1 SPRY3 FAM50A MIR1184-2 OPN1MW MIR664B SMIM9 MIR1184-3 IRAK1 TMLHE-AS1 SNORA70 CTAG1A MIR6858 GDI1 TAZ LAGE3 G6PD MIR718 MTCP1 CLIC2 CTAG1B IKBKG
nsv519042 Chr.X:154082978 - 154601444 on Build GRCh38 Gain OPN1MW2 FAM3A FLNA SLC10A3 FAM50A MECP2 PLXNA3 OPN1MW OPN1MW3 SNORA70 CTAG1A DNASE1L1 MIR6858 GDI1 TAZ LAGE3 G6PD TKTL1 LOC107987332 UBL4A ATP6AP1 EMD FAM223A IKBKG RPL10 OPN1LW LOC105373386 CH17-340M24.3 TEX28
esv33199 Chr.X:153065734 - 154591978 on Build GRCh38 Gain+Loss LOC105373383 SLC10A3 L1CAM MECP2 PLXNA3 SSR4 HCFC1-AS1 OPN1MW3 FAM58A DNASE1L1 LOC107983954 NAA10 TKTL1 DUSP9 LOC107987332 PNCK UBL4A ATP6AP1 HCFC1 LOC105373377 MIR3202-1 ARHGAP4 EMD FAM223A RPL10 OPN1LW LOC105373386 CH17-340M24.3 HAUS7 TEX28 TMEM187 BGN TREX2 OPN1MW2 MIR3202-2 FAM3A FLNA FAM50A ZNF275 OPN1MW ATP2B3 IRAK1 SLC6A8 SNORA70 ABCD1 CTAG1A MIR6858 BCAP31 GDI1 TAZ LAGE3 G6PD IDH3G LCA10 MIR718 AVPR2 PDZD4 RENBP ZFP92 IKBKG SRPK3 MAGEA1 LOC105373381 PNMA6A PLXNB3 LOC105373378
nsv508816 Chr.X:154492171 - 154591783 on Build GRCh38 Insertion FAM223A IKBKG FAM3A G6PD CTAG1A

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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