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See other RTEL1 CNV Assays ›
Gene Symbol
RTEL1
Assay Reference Genome
Location

Chr.20:63672606 on build GRCh38
Cytoband
20q13.33
Assay ID Hs00146631_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51750

Gene Name:

 regulator of telomere elongation helicase 1

Gene Aliases:

 C20orf41, DKCA4, DKCB5, NHL, PFBMFT3, RTEL

Location:

 Chr.20:63657810-63696253 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 9 - Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTEL1 NM_001283009.1 NP_001269938.1
NM_001283010.1 NP_001269939.1
NM_016434.3 NP_057518.1
NM_032957.4 NP_116575.3
AF217795.1 AAF33687.1
AK299332.1
AK302508.1
AK304798.1
JX119186.1

Target Gene Details

Entrez Gene ID:

 100533107

Gene Name:

 RTEL1-TNFRSF6B readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.20:63657810-63698698 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 9 - Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTEL1-TNFRSF6B NR_037882.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953308 Chr.20:63650148 - 63831847 on Build GRCh38 Deletion ZBTB46 ZGPAT SLC2A4RG STMN3 ZBTB46-AS1 RTEL1-TNFRSF6B RTEL1 TNFRSF6B ARFRP1 LIME1
nsv1160690 Chr.20:63639552 - 63744287 on Build GRCh38 Deletion ZBTB46 ZGPAT SLC2A4RG STMN3 RTEL1-TNFRSF6B RTEL1 TNFRSF6B ARFRP1 LIME1
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss MIR941-5 LOC100505771 ZBTB46-AS1 MIR941-4 GMEB2 MIR941-1 TNFRSF6B MIR647 MIR941-3 SLC2A4RG NPBWR2 RTEL1-TNFRSF6B RTEL1 PRPF6 ZNF512B LINC00176 SOX18 UCKL1-AS1 SAMD10 LIME1 LINC00266-1 ZBTB46 ZGPAT MIR6813 MIR941-2 STMN3 RGS19 PCMTD2 MYT1 UCKL1 DNAJC5 OPRL1 LKAAEAR1 TPD52L2 ABHD16B TCEA2 MIR1914 C20orf181 ARFRP1
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss HELZ2 PTK6 LOC100505771 ZBTB46 ZGPAT STMN3 FNDC11 GMEB2 TNFRSF6B SRMS SLC2A4RG RTEL1-TNFRSF6B PPDPF RTEL1 ARFRP1 LIME1 EEF1A2
nsv9828 Chr.20:63668275 - 63673766 on Build GRCh38 Gain+Loss RTEL1-TNFRSF6B RTEL1
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss HELZ2 PTK6 LOC100505771 ZBTB46 ZGPAT STMN3 KCNQ2 FNDC11 GMEB2 TNFRSF6B SRMS SLC2A4RG RTEL1-TNFRSF6B PPDPF RTEL1 ARFRP1 LIME1 EEF1A2

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