Hs00155973_cn

• Gene Symbol: CSDC2
• Assay Reference Genome Location: Chr.22:41576260 on build GRCh38
• Cytoband: 22q13.2

Target Gene Details

• Entrez Gene ID: 27254
• Gene Name: cold shock domain containing C2
• Gene Aliases: PIPPIN, dJ347H13.2
• Location: Chr.22:41561010-41576666 on Build GRCh38
• Assay Gene Location: Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CSDC2	NM_014460.3	4	2124	NP_055275.1
	AL834417.1	4	2009	CAD39079.2
	U79280.1	1	978	AAB50218.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv516925	Chr.22:41252498 - 41585953 on Build GRCh38	Loss	PMM1 RANGAP1 LOC105373044 TOB2 MIR6889 PHF5A ZC3H7B CSDC2 ACO2 LOC100996598 TEF POLR3H
nsv1055166	Chr.22:41536399 - 41622240 on Build GRCh38	Gain	XRCC6 PMM1 LOC105373044 CSDC2 DESI1 POLR3H
nsv834209	Chr.22:41563516 - 41746056 on Build GRCh38	Loss	XRCC6 PMM1 SNU13 C22orf46 MEI1 CSDC2 DESI1
nsv524585	Chr.22:40993505 - 41794305 on Build GRCh38	Loss	XRCC6 PMM1 RANGAP1 EP300 SNORD140 MEI1 ACO2 LOC100996598 LOC105373044 SNU13 TOB2 C22orf46 MIR6889 L3MBTL2 PHF5A ZC3H7B CSDC2 EP300-AS1 MIR1281 DESI1 CHADL TEF POLR3H
nsv3639	Chr.22:41571809 - 41602871 on Build GRCh38	Insertion	PMM1 CSDC2 DESI1
esv3647800	Chr.22:41574227 - 41593225 on Build GRCh38	Gain	PMM1 CSDC2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
mRNA processing

Function(s)

DNA binding
RNA binding
protein binding
transcription factor binding