Hs00161182_cn

• Gene Symbol: EDC4
• Assay Reference Genome Location: Chr.16:67881403 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 23644
• Gene Name: enhancer of mRNA decapping 4
• Gene Aliases: GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8
• Location: Chr.16:67873023-67884514 on Build GRCh38
• Assay Gene Location: Overlaps Exon 20 - Intron 20

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EDC4	NM_014329.4			NP_055144.3
	AK128582.1
	AK291049.1
	BC043616.1			AAH43616.1
	BC053598.1			AAH53598.1
	BC064567.1			AAH64567.1
	L26339.1			AAA21833.1
	U17474.1			AAB51444.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	AGRP CTRL PSKH1 PARD6A HSD11B2 ACD TPPP3 THAP11 DUS2 KIAA0895L FBXL8 SLC9A5 DPEP2 LCAT E2F4 DPEP3 PLEKHG4 TSNAXIP1 TRADD LRRC36 ATP6V0D1 NUTF2 LOC105369155 LOC100131303 GFOD2 ENKD1 LOC107984813 FHOD1 FAM65A ELMO3 HSF4 PSMB10 EXOC3L1 NRN1L RANBP10 ZDHHC1 CARMIL2 LRRC29 C16orf86 DDX28 NOL3 MIR328 EDC4 CENPT LOC100505942 TMEM208 KCTD19 CTCF SLC12A4
nsv1844	Chr.16:67868325 - 67917356 on Build GRCh38	Deletion	NRN1L NUTF2 PSKH1 EDC4
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	AGRP CTRL PSKH1 PARD6A HSD11B2 ACD TPPP3 THAP11 DUS2 KIAA0895L FBXL8 SLC9A5 DPEP2 LCAT E2F4 DPEP3 PLEKHG4 TSNAXIP1 TRADD LRRC36 ATP6V0D1 NUTF2 LOC105369155 LOC100131303 GFOD2 ENKD1 LOC107984813 FHOD1 FAM65A ELMO3 HSF4 PSMB10 EXOC3L1 NRN1L RANBP10 ZDHHC1 CARMIL2 LRRC29 C16orf86 DDX28 B3GNT9 NOL3 MIR328 EDC4 CENPT LOC100505942 TMEM208 KCTD19 CTCF SLC12A4 C16orf70

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA capping factor

Gene Ontology Categories:

Process(es)

biological_process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

protein binding