Hs00169077_cn

• Gene Symbol: GPR39
• Assay Reference Genome Location: Chr.2:132645742 on build GRCh38
• Cytoband: 2q21.2

Target Gene Details

• Entrez Gene ID: 2863
• Gene Name: G protein-coupled receptor 39
• Gene Aliases: -
• Location: Chr.2:132415972-132646596 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GPR39	NM_001508.2	2	1967	NP_001499.1
	AI459805.1	1	193
	AK122643.1	2	1967
	AK123759.1	3	1201

Target Gene Details

• Entrez Gene ID: 116372
• Gene Name: LY6/PLAUR domain containing 1
• Gene Aliases: LYPDC1, PHTS
• Location: Chr.2:132643280-132671579 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LYPD1	NM_001077427.3	3	1078	NP_001070895.1
	NM_001321234.1	4	1040	NP_001308163.1
	NM_001321235.1	3	1201	NP_001308164.1
	NM_144586.6	3	1167	NP_653187.3
	XM_011510546.2	4	1873	XP_011508848.1
	AK075487.1	3	1002	BAC11647.1
	AK094501.1	4	943	BAC04368.1
	AK123029.1	4	900	BAC85518.1
	AK130005.1	4	879	BAC85273.1
	AK309668.1	3	1078
	AK309849.1
	AY358628.1	3	849	AAQ88991.1
	BC017318.2			AAH17318.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv583155	Chr.2:132495813 - 132657597 on Build GRCh38	Loss	GPR39 LYPD1
nsv583158	Chr.2:132558519 - 133104527 on Build GRCh38	Gain	NCKAP5 GPR39 LYPD1 LOC101928185
nsv583152	Chr.2:132369502 - 133631550 on Build GRCh38	Gain	NCKAP5 LOC101928161 GPR39 LYPD1 LOC101928185
nsv1011421	Chr.2:132137668 - 132924612 on Build GRCh38	Gain	NCKAP5 FAM201B GPR39 LYPD1 MIR663B LOC101928185 ZNF806 ANKRD30BL

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

G-protein coupled receptor, transmembrane signal receptor

Gene Ontology Categories:

Process(es)

G-protein coupled receptor signaling pathway
cell activation

Function(s)

G-protein coupled receptor activity
metal ion binding