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Gene Symbol
DXO
Assay Reference Genome
Location

Chr.6:31970021 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00197011_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1797

Gene Name:

 decapping exoribonuclease

Gene Aliases:

 DOM3L, DOM3Z, NG6, RAI1

Location:

 Chr.6:31969811-31972290 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DXO NM_005510.3 NP_005501.2
XM_006715005.3 XP_006715068.1
XM_017010329.1 XP_016865818.1
AF059252.1 AAC78603.1
BC009344.2 AAH09344.1
BC019083.2 AAH19083.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss SNORD48 MIR6833 NOTCH4 PPT2-EGFL8 C2 HLA-DRB1 AGPAT1 CYP21A1P LOC100507547 NEU1 PRRT1 RNF5 BTNL2 HLA-DQB1 HLA-DQA1 PPT2 PBX2 HLA-DRB6 STK19 HLA-DRA SLC44A4 TNXA TNXB AGER HLA-DQB1-AS1 ZBTB12 HCG23 LOC101929163 EGFL8 EHMT2 C4A NELFE C4B C6orf48 GPSM3 SKIV2L CYP21A2 ATF6B MIR1236 C2-AS1 SNORD52 DXO FKBPL HSPA1B HSPA1A C6orf10 CFB MIR6721 HLA-DRB5
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss MIR6833 NOTCH4 PPT2-EGFL8 C4A C2 NELFE C4B GPSM3 AGPAT1 CYP21A1P LOC100507547 PRRT1 SKIV2L RNF5 CYP21A2 PPT2 PBX2 ATF6B STK19 TNXA TNXB AGER MIR1236 C2-AS1 DXO FKBPL CFB MIR6721 EGFL8
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion SNORD48 MIR6833 NOTCH4 SNORD117 C6orf47 PPT2-EGFL8 C2 NFKBIL1 HLA-DRB1 AGPAT1 ATP6V1G2 CYP21A1P LOC100507547 NEU1 PRRT1 RNF5 AIF1 BTNL2 MSH5 PPT2 PBX2 HLA-DRB6 DDAH2 STK19 HLA-DRA SLC44A4 TNXA SAPCD1 LY6G6D TNXB ABHD16A AGER LOC102725068 LTB LTA MIR6832 ZBTB12 HCG23 CSNK2B DDX39B LOC101929163 MSH5-SAPCD1 EGFL8 LY6G6C CLIC1 EHMT2 C4A NELFE C4B C6orf48 VWA7 GPSM3 MCCD1 VARS SKIV2L CYP21A2 BAG6 ATP6V1G2-DDX39B ATF6B TNF APOM LY6G6E SNORA38 SAPCD1-AS1 LY6G5B MIR1236 MIR4646 C2-AS1 SNORD52 LOC100287329 LSM2 DXO LY6G6F PRRC2A MICB HSPA1L NCR3 SNORD84 FKBPL HCG26 C6orf25 GPANK1 HSPA1B HSPA1A LY6G5C C6orf10 CFB DDX39B-AS1 MIR6721 HCP5 LST1 HLA-DRB5
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion MIR6833 PPT2-EGFL8 SLC39A7 C2 PHF1 NFKBIL1 HLA-DRB1 AGPAT1 ATP6V1G2 NEU1 PRRT1 HSD17B8 AIF1 BTNL2 VPS52 DAXX HLA-DQA1 MSH5 MIR219A1 PBX2 DDAH2 STK19 HLA-DPB2 SLC44A4 MIR3135B AGER TAPBP LTA HLA-DQB2 CSNK2B COL11A2 HLA-DQA2 RXRB EGFL8 CLIC1 TAP2 PPP1R2P1 PFDN6 C4A RGL2 LOC100294145 VARS BAG6 KIFC1 ATP6V1G2-DDX39B ATF6B HLA-DMB APOM LY6G6E SNORA38 SAPCD1-AS1 LY6G5B MIR1236 MIR4646 LOC100287329 PSMB8 LY6G6F PRRC2A NCR3 SNORD84 C6orf25 GPANK1 HSPA1B HSPA1A C6orf10 RING1 HLA-DPB1 HLA-DOA DDX39B-AS1 HCP5 SNORD48 NOTCH4 SNORD117 C6orf47 TAP1 CYP21A1P LOC100507547 HLA-DPA1 RNF5 HLA-DQB1 PPT2 MIR6834 ZBTB9 HLA-DRB6 HLA-DRA TNXA SAPCD1 LY6G6D TNXB ABHD16A HLA-DQB1-AS1 LOC102725068 HLA-DMA LTB HLA-DOB MIR6832 ZBTB22 ZBTB12 HCG23 CUTA DDX39B LOC101929163 MSH5-SAPCD1 LY6G6C EHMT2 HCG25 NELFE C4B HCG24 C6orf48 VWA7 GPSM3 MCCD1 SYNGAP1 MIR5004 BRD2 SKIV2L CYP21A2 MIR6873 TNF RPS18 PSMB8-AS1 C2-AS1 SNORD52 LSM2 B3GALT4 WDR46 DXO MICB HSPA1L FKBPL HCG26 LY6G5C PSMB9 CFB MIR6721 LST1 HLA-DRB5
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss SNORD48 SNORD117 C6orf47 C2 NFKBIL1 MICA ATP6V1G2 CYP21A1P NEU1 AIF1 MSH5 HLA-B DDAH2 STK19 SLC44A4 TNXA SAPCD1 LY6G6D TNXB ABHD16A LOC102725068 LTB LTA MIR6832 ZBTB12 CSNK2B DDX39B MSH5-SAPCD1 LY6G6C CLIC1 EHMT2 C4A NELFE C4B C6orf48 VWA7 MCCD1 VARS SKIV2L CYP21A2 BAG6 ATP6V1G2-DDX39B MIR6891 TNF APOM LY6G6E SNORA38 SAPCD1-AS1 LY6G5B MIR1236 MIR4646 C2-AS1 SNORD52 LOC100287329 LSM2 DXO LY6G6F PRRC2A MICB HSPA1L NCR3 SNORD84 HCG26 C6orf25 GPANK1 HSPA1B HSPA1A LY6G5C CFB DDX39B-AS1 HCP5 LST1
nsv830628 Chr.6:31919777 - 31979823 on Build GRCh38 Loss DXO SKIV2L C2 NELFE MIR1236 C2-AS1 CFB STK19
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion MIR6833 PPT2-EGFL8 SLC39A7 C2 PHF1 NFKBIL1 HLA-DRB1 AGPAT1 ATP6V1G2 NEU1 PRRT1 HSD17B8 AIF1 BTNL2 VPS52 DAXX HLA-DQA1 MSH5 MIR219A1 PBX2 DDAH2 STK19 HLA-DPB2 SLC44A4 MIR3135B AGER TAPBP LTA HLA-DQB2 CSNK2B COL11A2 HLA-DQA2 RXRB EGFL8 CLIC1 TAP2 PPP1R2P1 PFDN6 C4A RGL2 LOC100294145 VARS BAG6 KIFC1 ATP6V1G2-DDX39B ATF6B HLA-DMB APOM LY6G6E SNORA38 SAPCD1-AS1 LY6G5B MIR1236 MIR4646 LOC100287329 PSMB8 LY6G6F PRRC2A NCR3 SNORD84 C6orf25 GPANK1 HSPA1B HSPA1A C6orf10 RING1 HLA-DPB1 HLA-DOA DDX39B-AS1 HCP5 SNORD48 NOTCH4 SNORD117 C6orf47 TAP1 CYP21A1P LOC100507547 HLA-DPA1 RNF5 HLA-DQB1 PPT2 MIR6834 ZBTB9 HLA-DRB6 HLA-DRA TNXA SAPCD1 LY6G6D TNXB ABHD16A HLA-DQB1-AS1 LOC102725068 HLA-DMA LTB HLA-DOB MIR6832 ZBTB22 ZBTB12 HCG23 CUTA DDX39B LOC101929163 MSH5-SAPCD1 LY6G6C EHMT2 HCG25 NELFE C4B HCG24 C6orf48 VWA7 GPSM3 MCCD1 SYNGAP1 MIR5004 BRD2 SKIV2L CYP21A2 MIR6873 TNF RPS18 PSMB8-AS1 C2-AS1 SNORD52 LSM2 B3GALT4 WDR46 DXO MICB HSPA1L FKBPL HCG26 LY6G5C PSMB9 CFB MIR6721 LST1 HLA-DRB5
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss SNORD48 MIR6833 NOTCH4 SNORD117 C6orf47 PPT2-EGFL8 C2 NFKBIL1 MICA AGPAT1 ATP6V1G2 CYP21A1P LOC100507547 NEU1 PRRT1 RNF5 AIF1 BTNL2 MSH5 HLA-B PPT2 PBX2 DDAH2 STK19 HLA-DRA SLC44A4 TNXA SAPCD1 LY6G6D TNXB ABHD16A AGER LOC102725068 LTB LTA MIR6832 ZBTB12 HCG23 CSNK2B DDX39B LOC101929163 MSH5-SAPCD1 EGFL8 LY6G6C CLIC1 EHMT2 C4A NELFE C4B C6orf48 VWA7 GPSM3 MCCD1 VARS SKIV2L CYP21A2 BAG6 ATP6V1G2-DDX39B MIR6891 ATF6B TNF APOM LY6G6E SNORA38 SAPCD1-AS1 LY6G5B MIR1236 MIR4646 C2-AS1 SNORD52 LOC100287329 LSM2 DXO LY6G6F PRRC2A MICB HSPA1L NCR3 SNORD84 FKBPL HCG26 C6orf25 GPANK1 HSPA1B HSPA1A LY6G5C C6orf10 CFB DDX39B-AS1 MIR6721 HCP5 LST1
nsv5247 Chr.6:31957962 - 32055439 on Build GRCh38 Deletion DXO SKIV2L TNXA CYP21A2 C4A NELFE TNXB C4B STK19 CYP21A1P

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