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Gene Symbol
DXO
Assay Reference Genome
Location

Chr.6:31970021 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00197011_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1797

Gene Name:

 decapping exoribonuclease

Gene Aliases:

 DOM3L, DOM3Z, NG6, RAI1

Location:

 Chr.6:31969811-31972290 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DXO NM_005510.3 NP_005501.2
XM_006715005.3 XP_006715068.1
XM_017010329.1 XP_016865818.1
AF059252.1 AAC78603.1
BC009344.2 AAH09344.1
BC019083.2 AAH19083.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss HLA-DQA1 HLA-DQB1-AS1 MIR6833 HLA-DRA HSPA1A ZBTB12 HLA-DRB5 STK19 EHMT2 C2-AS1 SKIV2L NELFE MIR1236 TNXB C6orf48 AGER NEU1 C4A PBX2 MIR6721 HLA-DRB6 SNORD48 C6orf10 LOC101929163 AGPAT1 C2 HCG23 SNORD52 GPSM3 BTNL2 FKBPL C4B CYP21A1P HLA-DQB1 PPT2 CYP21A2 EGFL8 RNF5 PRRT1 TNXA LOC100507547 CFB ATF6B PPT2-EGFL8 HSPA1B NOTCH4 HLA-DRB1 DXO SLC44A4
nsv428141 Chr.6:31903735 - 32125066 on Build GRCh38 Gain+Loss CFB ATF6B C2-AS1 SKIV2L NELFE MIR1236 C4B CYP21A1P TNXB C4A CYP21A2 C2 DXO TNXA STK19
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LST1 MIR6833 MIR6832 HLA-DRA LY6G5B HSPA1A ZBTB12 CSNK2B C6orf25 ATP6V1G2-DDX39B VWA7 HLA-DRB5 HSPA1L TNF C6orf47 DDX39B STK19 EHMT2 C2-AS1 GPANK1 SKIV2L NELFE MIR1236 NFKBIL1 TNXB C6orf48 LY6G6F HCP5 AGER ATP6V1G2 MICB NEU1 C4A PBX2 MIR6721 SAPCD1-AS1 HLA-DRB6 SNORD48 C6orf10 LOC101929163 AGPAT1 C2 PRRC2A HCG23 SNORD52 GPSM3 BTNL2 FKBPL C4B CYP21A1P MCCD1 MIR4646 LSM2 SNORD84 CLIC1 PPT2 DDX39B-AS1 CYP21A2 EGFL8 LY6G6D RNF5 LY6G6E LY6G6C DDAH2 ABHD16A PRRT1 NCR3 TNXA LOC102725068 LOC100507547 CFB MSH5 ATF6B PPT2-EGFL8 HSPA1B BAG6 SNORA38 LTA LTB NOTCH4 APOM HCG26 HLA-DRB1 VARS LY6G5C MSH5-SAPCD1 LOC100287329 SNORD117 AIF1 SAPCD1 DXO SLC44A4
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss LST1 HLA-B MIR6832 LY6G5B HSPA1A ZBTB12 CSNK2B C6orf25 ATP6V1G2-DDX39B VWA7 HSPA1L TNF C6orf47 DDX39B STK19 EHMT2 C2-AS1 GPANK1 SKIV2L NELFE MIR1236 NFKBIL1 TNXB C6orf48 LY6G6F HCP5 ATP6V1G2 MICB NEU1 C4A SAPCD1-AS1 SNORD48 C2 PRRC2A MICA SNORD52 C4B CYP21A1P MCCD1 MIR4646 LSM2 SNORD84 CLIC1 DDX39B-AS1 CYP21A2 LY6G6D LY6G6E LY6G6C DDAH2 MIR6891 ABHD16A NCR3 TNXA LOC102725068 CFB MSH5 HSPA1B BAG6 SNORA38 LTA LTB APOM HCG26 VARS LY6G5C MSH5-SAPCD1 LOC100287329 SNORD117 AIF1 SAPCD1 DXO SLC44A4
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion LST1 PHF1 HLA-DQB1-AS1 LOC100294145 MIR6832 RING1 LY6G5B HSPA1A CSNK2B VPS52 ATP6V1G2-DDX39B HCG24 HLA-DRB5 RXRB TAP2 CUTA EHMT2 C2-AS1 ZBTB9 NELFE HLA-DQA2 NFKBIL1 HCG25 HCP5 ATP6V1G2 MICB NEU1 HLA-DMA PBX2 B3GALT4 DAXX SNORD48 WDR46 C6orf10 LOC101929163 C2 SNORD52 PFDN6 CYP21A1P MIR4646 SNORD84 CLIC1 HLA-DQB1 DDX39B-AS1 EGFL8 COL11A2 LY6G6E LY6G6C PSMB8 ABHD16A NCR3 LOC100507547 CFB MSH5 ATF6B PPP1R2P1 BAG6 PSMB8-AS1 HLA-DPA1 LTB NOTCH4 HCG26 HLA-DRB1 BRD2 VARS MIR219A1 PSMB9 RPS18 TAP1 SNORD117 SLC39A7 AIF1 SAPCD1 DXO SLC44A4 HLA-DQA1 MIR6833 HLA-DRA MIR6834 ZBTB12 C6orf25 HLA-DMB VWA7 HSPA1L TNF C6orf47 DDX39B STK19 GPANK1 MIR6873 SKIV2L MIR1236 TNXB C6orf48 LY6G6F MIR5004 AGER C4A MIR6721 SAPCD1-AS1 HLA-DRB6 AGPAT1 PRRC2A HLA-DOA HLA-DPB2 HCG23 GPSM3 HLA-DOB BTNL2 FKBPL C4B MCCD1 LSM2 TAPBP PPT2 CYP21A2 MIR3135B LY6G6D RNF5 SYNGAP1 HLA-DPB1 RGL2 DDAH2 PRRT1 TNXA LOC102725068 HSD17B8 PPT2-EGFL8 HSPA1B SNORA38 HLA-DQB2 ZBTB22 LTA APOM LY6G5C MSH5-SAPCD1 LOC100287329 KIFC1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion LST1 PHF1 HLA-DQB1-AS1 LOC100294145 MIR6832 RING1 LY6G5B HSPA1A CSNK2B VPS52 ATP6V1G2-DDX39B HCG24 HLA-DRB5 RXRB TAP2 CUTA EHMT2 C2-AS1 ZBTB9 NELFE HLA-DQA2 NFKBIL1 HCG25 HCP5 ATP6V1G2 MICB NEU1 HLA-DMA PBX2 B3GALT4 DAXX SNORD48 WDR46 C6orf10 LOC101929163 C2 SNORD52 PFDN6 CYP21A1P MIR4646 SNORD84 CLIC1 HLA-DQB1 DDX39B-AS1 EGFL8 COL11A2 LY6G6E LY6G6C PSMB8 ABHD16A NCR3 LOC100507547 CFB MSH5 ATF6B PPP1R2P1 BAG6 PSMB8-AS1 HLA-DPA1 LTB NOTCH4 HCG26 HLA-DRB1 BRD2 VARS MIR219A1 PSMB9 RPS18 TAP1 SNORD117 SLC39A7 AIF1 SAPCD1 DXO SLC44A4 HLA-DQA1 MIR6833 HLA-DRA MIR6834 ZBTB12 C6orf25 HLA-DMB VWA7 HSPA1L TNF C6orf47 DDX39B STK19 GPANK1 MIR6873 SKIV2L MIR1236 TNXB C6orf48 LY6G6F MIR5004 AGER C4A MIR6721 SAPCD1-AS1 HLA-DRB6 AGPAT1 PRRC2A HLA-DOA HLA-DPB2 HCG23 GPSM3 HLA-DOB BTNL2 FKBPL C4B MCCD1 LSM2 TAPBP PPT2 CYP21A2 MIR3135B LY6G6D RNF5 SYNGAP1 HLA-DPB1 RGL2 DDAH2 PRRT1 TNXA LOC102725068 HSD17B8 PPT2-EGFL8 HSPA1B SNORA38 HLA-DQB2 ZBTB22 LTA APOM LY6G5C MSH5-SAPCD1 LOC100287329 KIFC1
nsv830628 Chr.6:31919777 - 31979823 on Build GRCh38 Loss CFB C2-AS1 SKIV2L NELFE MIR1236 C2 DXO STK19
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LST1 MIR6833 HLA-B MIR6832 HLA-DRA LY6G5B HSPA1A ZBTB12 CSNK2B C6orf25 ATP6V1G2-DDX39B VWA7 HSPA1L TNF C6orf47 DDX39B STK19 EHMT2 C2-AS1 GPANK1 SKIV2L NELFE MIR1236 NFKBIL1 TNXB C6orf48 LY6G6F HCP5 AGER ATP6V1G2 MICB NEU1 C4A PBX2 MIR6721 SAPCD1-AS1 SNORD48 C6orf10 LOC101929163 AGPAT1 C2 PRRC2A MICA HCG23 SNORD52 GPSM3 BTNL2 FKBPL C4B CYP21A1P MCCD1 MIR4646 LSM2 SNORD84 CLIC1 PPT2 DDX39B-AS1 CYP21A2 EGFL8 LY6G6D RNF5 LY6G6E LY6G6C DDAH2 MIR6891 ABHD16A PRRT1 NCR3 TNXA LOC102725068 LOC100507547 CFB MSH5 ATF6B PPT2-EGFL8 HSPA1B BAG6 SNORA38 LTA LTB NOTCH4 APOM HCG26 VARS LY6G5C MSH5-SAPCD1 LOC100287329 SNORD117 AIF1 SAPCD1 DXO SLC44A4
nsv284 Chr.6:31957962 - 32028944 on Build GRCh38 Deletion SKIV2L NELFE C4B CYP21A1P C4A DXO TNXA STK19

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