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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31659285 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00204954_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 1 1488 NP_067007.3
AJ245433.1 1 1449 CAB51603.1
AK315349.1 1 1177
BC012950.1 1 1488 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion C4B PPT2 CSNK2B LTA HCG23 C2-AS1 NCR3 SNORD117 ZBTB12 TNF LY6G5C HLA-DRB5 VARS ATP6V1G2-DDX39B HLA-DRA LSM2 NFKBIL1 FKBPL DDAH2 LOC102725068 RNF5 LY6G5B MSH5-SAPCD1 NELFE MIR6832 NEU1 C2 LOC100287329 MICB EHMT2 LY6G6F LTB PPT2-EGFL8 MIR1236 MSH5 C6orf47 DDX39B-AS1 HSPA1B HLA-DRB6 LY6G6D C6orf10 C6orf48 LY6G6E ATF6B SNORD52 CFB HCP5 SNORD48 MIR6721 ABHD16A HSPA1L DXO TNXB TNXA LST1 SNORD84 AGPAT1 HCG26 APOM C6orf25 NOTCH4 GPSM3 LY6G6C PBX2 BAG6 LOC101929163 CYP21A1P ATP6V1G2 GPANK1 CYP21A2 HLA-DRB1 MIR4646 C4A BTNL2 MCCD1 AGER SNORA38 AIF1 PRRC2A MIR6833 CLIC1 LOC100507547 VWA7 DDX39B HSPA1A SKIV2L EGFL8 STK19 SAPCD1-AS1 SLC44A4 PRRT1 SAPCD1
nsv601942 Chr.6:31607499 - 31664357 on Build GRCh38 Loss GPANK1 MIR6832 C6orf47 APOM SNORA38 AIF1 PRRC2A BAG6
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss C4B CSNK2B LTA C2-AS1 NCR3 SNORD117 ZBTB12 MICA TNF LY6G5C VARS ATP6V1G2-DDX39B LSM2 NFKBIL1 DDAH2 LOC102725068 LY6G5B MSH5-SAPCD1 NELFE MIR6832 NEU1 C2 LOC100287329 MICB EHMT2 LY6G6F LTB MIR1236 MSH5 C6orf47 DDX39B-AS1 HSPA1B LY6G6D C6orf48 LY6G6E SNORD52 CFB HCP5 SNORD48 ABHD16A HSPA1L DXO MIR6891 TNXB TNXA LST1 SNORD84 HCG26 APOM C6orf25 LY6G6C BAG6 CYP21A1P ATP6V1G2 GPANK1 CYP21A2 MIR4646 C4A HLA-B MCCD1 SNORA38 AIF1 PRRC2A CLIC1 VWA7 DDX39B HSPA1A SKIV2L STK19 SAPCD1-AS1 SLC44A4 SAPCD1
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HLA-DPB1 HLA-DQB1 RGL2 C4B PPT2 ZBTB9 COL11A2 HLA-DOB NCR3 SNORD117 TNF VPS52 LY6G5C KIFC1 HLA-DRB5 VARS PPP1R2P1 NFKBIL1 FKBPL TAPBP LOC102725068 RNF5 NELFE MIR6832 NEU1 C2 LOC100287329 MICB EHMT2 MIR6873 TAP1 MSH5 PSMB9 C6orf47 DDX39B-AS1 HSPA1B HLA-DRB6 LY6G6D LY6G6E ATF6B HLA-DQB2 SNORD48 MIR6721 HLA-DQB1-AS1 HCG24 TNXB TNXA HLA-DQA1 LST1 SNORD84 APOM DAXX C6orf25 MIR6834 PHF1 BAG6 CYP21A1P CYP21A2 SLC39A7 MIR4646 C4A SNORA38 AIF1 MIR6833 CLIC1 LOC100507547 HLA-DQA2 HLA-DOA EGFL8 HSD17B8 MIR3135B SLC44A4 SAPCD1 CSNK2B LTA HCG23 C2-AS1 BRD2 ZBTB12 ATP6V1G2-DDX39B HLA-DRA LSM2 HLA-DMA DDAH2 LOC100294145 LY6G5B MSH5-SAPCD1 ZBTB22 HLA-DMB B3GALT4 LY6G6F LTB PPT2-EGFL8 MIR1236 C6orf10 C6orf48 SNORD52 CFB HCP5 ABHD16A CUTA HSPA1L DXO MIR219A1 PSMB8-AS1 WDR46 AGPAT1 HCG26 NOTCH4 HLA-DPB2 SYNGAP1 GPSM3 LY6G6C PBX2 LOC101929163 ATP6V1G2 PSMB8 GPANK1 MIR5004 HLA-DRB1 PFDN6 BTNL2 MCCD1 AGER HLA-DPA1 TAP2 HCG25 PRRC2A VWA7 DDX39B HSPA1A RXRB SKIV2L STK19 SAPCD1-AS1 RPS18 PRRT1 RING1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HLA-DPB1 HLA-DQB1 RGL2 C4B PPT2 ZBTB9 COL11A2 HLA-DOB NCR3 SNORD117 TNF VPS52 LY6G5C KIFC1 HLA-DRB5 VARS PPP1R2P1 NFKBIL1 FKBPL TAPBP LOC102725068 RNF5 NELFE MIR6832 NEU1 C2 LOC100287329 MICB EHMT2 MIR6873 TAP1 MSH5 PSMB9 C6orf47 DDX39B-AS1 HSPA1B HLA-DRB6 LY6G6D LY6G6E ATF6B HLA-DQB2 SNORD48 MIR6721 HLA-DQB1-AS1 HCG24 TNXB TNXA HLA-DQA1 LST1 SNORD84 APOM DAXX C6orf25 MIR6834 PHF1 BAG6 CYP21A1P CYP21A2 SLC39A7 MIR4646 C4A SNORA38 AIF1 MIR6833 CLIC1 LOC100507547 HLA-DQA2 HLA-DOA EGFL8 HSD17B8 MIR3135B SLC44A4 SAPCD1 CSNK2B LTA HCG23 C2-AS1 BRD2 ZBTB12 ATP6V1G2-DDX39B HLA-DRA LSM2 HLA-DMA DDAH2 LOC100294145 LY6G5B MSH5-SAPCD1 ZBTB22 HLA-DMB B3GALT4 LY6G6F LTB PPT2-EGFL8 MIR1236 C6orf10 C6orf48 SNORD52 CFB HCP5 ABHD16A CUTA HSPA1L DXO MIR219A1 PSMB8-AS1 WDR46 AGPAT1 HCG26 NOTCH4 HLA-DPB2 SYNGAP1 GPSM3 LY6G6C PBX2 LOC101929163 ATP6V1G2 PSMB8 GPANK1 MIR5004 HLA-DRB1 PFDN6 BTNL2 MCCD1 AGER HLA-DPA1 TAP2 HCG25 PRRC2A VWA7 DDX39B HSPA1A RXRB SKIV2L STK19 SAPCD1-AS1 RPS18 PRRT1 RING1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss C4B PPT2 CSNK2B LTA HCG23 C2-AS1 NCR3 SNORD117 ZBTB12 MICA TNF LY6G5C VARS ATP6V1G2-DDX39B HLA-DRA LSM2 NFKBIL1 FKBPL DDAH2 LOC102725068 RNF5 LY6G5B MSH5-SAPCD1 NELFE MIR6832 NEU1 C2 LOC100287329 MICB EHMT2 LY6G6F LTB PPT2-EGFL8 MIR1236 MSH5 C6orf47 DDX39B-AS1 HSPA1B LY6G6D C6orf10 C6orf48 LY6G6E ATF6B SNORD52 CFB HCP5 SNORD48 MIR6721 ABHD16A HSPA1L DXO MIR6891 TNXB TNXA LST1 SNORD84 AGPAT1 HCG26 APOM C6orf25 NOTCH4 GPSM3 LY6G6C PBX2 BAG6 LOC101929163 CYP21A1P ATP6V1G2 GPANK1 CYP21A2 MIR4646 C4A HLA-B BTNL2 MCCD1 AGER SNORA38 AIF1 PRRC2A MIR6833 CLIC1 LOC100507547 VWA7 DDX39B HSPA1A SKIV2L EGFL8 STK19 SAPCD1-AS1 SLC44A4 PRRT1 SAPCD1
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion GPANK1 MIR6832 ABHD16A MIR4646 CSNK2B SNORA38 AIF1 PRRC2A LY6G6F LY6G5C C6orf47 APOM LY6G6E BAG6 LY6G5B
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss ABHD16A CSNK2B LTA NCR3 SNORD117 TNF LY6G5C LST1 SNORD84 ATP6V1G2-DDX39B APOM NFKBIL1 BAG6 LY6G5B ATP6V1G2 GPANK1 MIR6832 MCCD1 LOC100287329 SNORA38 AIF1 PRRC2A LTB DDX39B C6orf47 DDX39B-AS1

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