Hs00222499_cn

• Gene Symbol: DHX38
• Assay Reference Genome Location: Chr.16:72099789 on build GRCh38
• Cytoband: 16q22.2

Target Gene Details

• Entrez Gene ID: 9785
• Gene Name: DEAH-box helicase 38
• Gene Aliases: DDX38, PRP16, PRPF16
• Location: Chr.16:72093665-72112912 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DHX38	NM_014003.3	8	1373	NP_054722.2
	XM_005256269.1	7	1195	XP_005256326.1
	XM_011523484.1	8	1300	XP_011521786.1
	XM_011523485.1	8	1262	XP_011521787.1
	XM_017023913.1	7	1195	XP_016879402.1
	AF038391.1	7	1025	AAC39729.1
	AK291634.1	8	1165
	AK293776.1	9	1144
	AK297269.1	8	768
	AK297791.1
	AK301074.1
	AK309391.1	6	587
	AK311169.1
	BC004235.2	8	1149	AAH04235.1
	BC008340.1	8	1149	AAH08340.1
	D86977.1	8	1154

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2758654	Chr.16:71942441 - 72240448 on Build GRCh38	Gain	PMFBP1 HP PKD1L3 HPR DHODH TXNL4B DHX38
esv2714683	Chr.16:71950823 - 72151945 on Build GRCh38	Deletion	PMFBP1 HP PKD1L3 HPR DHODH TXNL4B DHX38
dgv3017n100	Chr.16:72040933 - 72757730 on Build GRCh38	Gain	PMFBP1 HP LINC01572 HPR TXNL4B DHX38 LOC107984814
nsv833273	Chr.16:71937902 - 72118955 on Build GRCh38	Loss	PMFBP1 HP PKD1L3 HPR DHODH TXNL4B DHX38

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA helicase

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome
termination of RNA polymerase II transcription
RNA export from nucleus
mRNA export from nucleus
mRNA 3'-end processing

Function(s)

ATP-dependent RNA helicase activity
protein binding
ATP binding
poly(A) RNA binding