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See other CDT1 CNV Assays ›
Gene Symbol
CDT1
Assay Reference Genome
Location

Chr.16:88805534 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00236886_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 81620

Gene Name:

 chromatin licensing and DNA replication factor 1

Gene Aliases:

 DUP, RIS2

Location:

 Chr.16:88803778-88809258 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDT1 NM_030928.3 4 637 NP_112190.2
AB053172.1 4 637 BAB61878.1
AF070552.1 2 178
AF321125.1 4 608 AAG45181.1
BC000137.2 4 599 AAH00137.2
BC008676.1 4 475 AAH08676.1
BC008860.2 4 530 AAH08860.2
BC009410.1 4 593 AAH09410.1
BC021126.1 2 169
BC049205.1 2 241 AAH49205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv573677 Chr.16:88764428 - 88805821 on Build GRCh38 Loss PIEZO1 CDT1
dgv5313n54 Chr.16:88795879 - 88806103 on Build GRCh38 Loss CDT1
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC100129697 APRT LINC00304 CDT1 GALNS ZNF778 LOC100289580 MIR4722 LOC339059 PABPN1L LOC400558 LOC105371409 LOC101927793 LOC107987238 CBFA2T3 TRAPPC2L CTU2 PIEZO1 ACSF3 SLC22A31 CDH15
nsv457617 Chr.16:88801844 - 88829729 on Build GRCh38 Gain LOC107987238 APRT CDT1 GALNS
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain SNAI3 LOC107987238 CTU2 APRT PIEZO1 CDT1 GALNS LOC100289580 MIR4722 LOC339059 RNF166 SNAI3-AS1
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain ANKRD11 LOC100129697 APRT LINC00304 CDT1 GALNS ZNF778 LOC105371414 LOC100289580 LOC339059 PABPN1L LOC400558 LOC105371409 LOC101927793 LOC107987238 CBFA2T3 TRAPPC2L PIEZO1 ACSF3 LOC100287036 SLC22A31 CDH15
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC101927793 LOC107987238 CBFA2T3 TRAPPC2L LOC100129697 APRT CDT1 GALNS PABPN1L LOC105371409
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss ZNF276 SPATA2L FANCA ANKRD11 LOC100129697 MIR4722 LOC339059 PABPN1L VPS9D1 DEF8 IL17C CBFA2T3 MVD CTU2 PIEZO1 TUBB3 TCF25 LOC101927817 DBNDD1 CPNE7 DPEP1 CDT1 ZNF778 LOC100289580 RNF166 CENPBD1 SNAI3 LOC101927793 FAM157C CYBA LOC107984817 URAHP AFG3L1P GALNS LOC105371414 LOC400558 SNAI3-AS1 CDK10 SPIRE2 GAS8 GAS8-AS1 LOC107987238 TRAPPC2L MC1R LOC105371419 CHMP1A SNORD68 CDH15 SPATA33 APRT RPL13 LINC00304 TUBB8P7 LOC105371409 PRDM7 VPS9D1-AS1 ACSF3 LOC100287036 SLC22A31 SPG7
nsv1063441 Chr.16:88767066 - 88861882 on Build GRCh38 Loss LOC107987238 TRAPPC2L APRT PIEZO1 CDT1 GALNS
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC101927793 LOC107987238 CBFA2T3 TRAPPC2L LOC100129697 APRT PIEZO1 CDT1 GALNS PABPN1L LOC105371409
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain LOC101927793 LOC107987238 CBFA2T3 TRAPPC2L APRT PIEZO1 CDT1 GALNS PABPN1L
nsv573715 Chr.16:88804814 - 88808224 on Build GRCh38 Loss CDT1
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC100129697 APRT CDT1 GALNS LOC100289580 MIR4722 LOC339059 PABPN1L LOC105371409 LOC101927793 LOC107987238 CBFA2T3 TRAPPC2L CTU2 PIEZO1
nsv573712 Chr.16:88796728 - 88809084 on Build GRCh38 Loss CDT1

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