Name: [Hs00238917_cn] [HCN3]
Creator: Thermo Fisher Scientific
Keywords: [HCN3] Assay, [hyperpolarization activated cyclic nucleotide gated potassium channel 3] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	57657
Gene Name:	hyperpolarization activated cyclic nucleotide gated potassium channel 3
Gene Aliases:	-
Location:	Chr.1:155277427-155289848 on Build GRCh38
Assay Gene Location:	Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HCN3	NM_020897.2	8	1975	NP_065948.1
	NR_073074.1	8	1842
	XM_011509816.2	8	2493	XP_011508118.1
	XM_011509817.2	7	1813	XP_011508119.1
	XM_011509818.2	7	1205	XP_011508120.1
	XM_017001918.1	7	1187	XP_016857407.1
	AB040968.2	8	1624	BAA96059.2
	AF488550.1	8	1819	AAO49470.1
	AK055840.1	7	2030
	AK299333.1	8	1815
	BC000066.1	7	1203	AAH00066.1
	BC028024.1	5	840	AAH28024.2

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv3032	Chr.1:155285619 - 155318185 on Build GRCh38	Insertion	HCN3 PKLR FDPS LOC105371451
nsv831636	Chr.1:155249432 - 155475073 on Build GRCh38	Loss	MIR555 SCAMP3 CLK2 HCN3 PKLR ASH1L RUSC1-AS1 POU5F1P4 FAM189B RUSC1 FDPS LOC105371451
esv33869	Chr.1:155253492 - 155948170 on Build GRCh38	Loss	SNORA80E ASH1L FAM189B MIR555 MSTO2P CLK2 PKLR ASH1L-AS1 RUSC1-AS1 MSTO1 LOC105371451 YY1AP1 RIT1 SCAMP3 LOC100505728 SCARNA26B POU5F1P4 GON4L RUSC1 FDPS KIAA0907 DAP3 ARHGEF2 SCARNA4 SYT11 HCN3 SCARNA26A RXFP4
nsv436027	Chr.1:155260761 - 155291532 on Build GRCh38	Insertion	SCAMP3 CLK2 HCN3 PKLR
nsv952214	Chr.1:155279610 - 155304509 on Build GRCh38	Deletion	HCN3 PKLR
esv2758971	Chr.1:155122502 - 155345016 on Build GRCh38	Gain	TRIM46 SCAMP3 SLC50A1 ASH1L MUC1 FAM189B RUSC1 FDPS CLK2 MIR92B MTX1 HCN3 GBAP1 PKLR GBA THBS3 DPM3 RUSC1-AS1 EFNA1 KRTCAP2 LOC105371451
esv23319	Chr.1:155257268 - 155292883 on Build GRCh38	Gain	SCAMP3 CLK2 HCN3 PKLR