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See other AXIN1 CNV Assays ›
Gene Symbol
AXIN1
Assay Reference Genome
Location

Chr.16:297073 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00239218_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8312

Gene Name:

 axin 1

Gene Aliases:

 AXIN, PPP1R49

Location:

 Chr.16:287440-355226 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 13 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AXIN1 NM_003502.3 NP_003493.1
NM_181050.2 NP_851393.1
NR_134879.1
XM_011522682.2 XP_011520984.1
XM_011522683.2 XP_011520985.1
XM_011522684.2 XP_011520986.1
XM_011522686.1 XP_011520988.1
XM_017023743.1 XP_016879232.1
XM_017023744.1 XP_016879233.1
XM_017023745.1 XP_016879234.1
XM_017023746.1 XP_016879235.1
AB208876.1 BAD92113.1
AF009674.1 AAC51624.1
BC017447.1 AAH17447.1
BC044648.1 AAH44648.1
KF615847.1
KF615848.1
KF615849.1
KF615850.1
KF615851.1
KF615852.1
KF615853.1
KF615854.1
KU178413.1
KU178414.1
KU178415.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LINC00235 HBM CEMP1 NPRL3 PRR25 LOC105371046 C1QTNF8 LOC100287175 MIR3176 MIR940 NUBP2 NOXO1 CRAMP1 GFER LOC105371045 TPSB2 ABCA17P PKD1 MRPS34 RGS11 TELO2 RHOT2 TRAF7 LOC106660606 UNKL MAPK8IP3 FAHD1 TSR3 ABCA3 SSTR5 RPL3L SLC9A3R2 MIR3177 MIR6859-4 GNG13 HAGHL MRPL28 RAB40C HBA2 BAIAP3 LMF1-AS1 RAB26 TMEM8A NPW RNPS1 PTX4 LOC652276 SNORD60 SOX8 MSLN MIR6511B1 IGFALS SSTR5-AS1 MIR3677 MIR662 NARFL METTL26 LOC105371184 FLJ42627 PRR35 MEIOB WDR24 LOC729652 STUB1 LOC100134368 ATP6V0C AXIN1 PRSS29P HAGH HBA1 RNF151 RHBDF1 NTN3 RHBDL1 WASIR2 TPSD1 FAM173A PRSS27 LOC107984876 MIR6767 DECR2 TSC2 MIR1225 NDUFB10 LOC107987233 MPG FBXL16 HBQ1 RPS2 CHTF18 ECI1 NME4 KCTD5 CAPN15 WFIKKN1 CCDC154 PIGQ MIR4717 HS3ST6 TBL3 TMEM204 AMDHD2 TBC1D24 MIR3180-5 ARHGDIG MCRIP2 NTHL1 SNHG19 RPUSD1 PDIA2 IFT140 C16orf59 WDR90 SNHG9 FAM234A LOC101929280 EME2 LOC105371038 MSRB1 CCDC78 RPL23AP5 BRICD5 LMF1 ERVK13-1 E4F1 C16orf91 PGP SPSB3 POLR3K ZNF598 METRN LUC7L SNORA78 SNRNP25 DNASE1L2 UBE2I PDPK1 JMJD8 CCNF SNORA64 CACNA1H MIR4516 CLCN7 NME3 NHLRC4 SNORA10 CASKIN1 GNPTG MIR5587 MIR3178 TPSG1 LOC105371047 LINC00254 TPSAB1 RAB11FIP3 SYNGR3 HN1L DDX11L10 LOC105371049 MLST8 HBZ MIR6768
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain NME4 MRPL28 PDIA2 LOC100134368 RPL23AP5 DECR2 RGS11 ARHGDIG RAB11FIP3 FAM234A AXIN1 TMEM8A
nsv952896 Chr.16:273501 - 321500 on Build GRCh38 Deletion PDIA2 RGS11 ARHGDIG AXIN1
esv3637564 Chr.16:287941 - 370218 on Build GRCh38 Gain MRPL28 AXIN1
nsv570951 Chr.16:279671 - 322597 on Build GRCh38 Loss PDIA2 ARHGDIG AXIN1
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain PDIA2 RGS11 ARHGDIG FAM234A AXIN1
nsv570947 Chr.16:272935 - 297326 on Build GRCh38 Loss PDIA2 RGS11 ARHGDIG AXIN1
esv3637565 Chr.16:296495 - 300305 on Build GRCh38 Loss AXIN1
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss NME4 MRPL28 PDIA2 LOC100134368 RPL23AP5 DECR2 RGS11 ARHGDIG RAB11FIP3 FAM234A AXIN1 TMEM8A

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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