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See other FAM234A CNV Assays ›
Gene Symbol
FAM234A
Assay Reference Genome
Location

Chr.16:268362 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00252409_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 83986

Gene Name:

 family with sequence similarity 234 member A

Gene Aliases:

 C16orf9, ITFG3, gs19

Location:

 Chr.16:234546-269943 on Build GRCh38

Assay Gene Location:

 Within Intron 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAM234A NR_104317.1
AK057165.1 BAB71374.1
AK294581.1

Target Gene Details

Entrez Gene ID:

 8786

Gene Name:

 regulator of G-protein signaling 11

Gene Aliases:

 RS11

Location:

 Chr.16:268301-275943 on Build GRCh38

Assay Gene Location:

 Within Exon 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RGS11 NM_001286485.1 16 2310 NP_001273414.1
NM_001286486.1 15 2178 NP_001273415.1
NM_003834.2 17 2354 NP_003825.1
NM_183337.2 17 2343 NP_899180.1
XM_011522719.2 18 2437 XP_011521021.1
XM_011522720.2 18 2377 XP_011521022.1
AB209582.1 9 4251 BAD92819.1
AF035153.1 17 2314 AAC69175.1
AF035154.1 17 2325 AAC69176.1
AK091701.1 15 2175
BC141803.1 17 2318
CK299324.1 1 80

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1479e59 Chr.16:267152 - 268350 on Build GRCh38 Duplication FAM234A RGS11
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NTHL1 KCTD5 SOX8 NME4 SSTR5-AS1 NDUFB10 FAM173A ABCA3 SNORA64 MIR3677 TBL3 MSRB1 PKD1 RPL23AP5 PDPK1 NHLRC4 MIR3176 STUB1 TPSD1 SNORA10 E4F1 RAB26 CCDC78 UBE2I SNORA78 IFT140 LOC729652 ATP6V0C SYNGR3 GNG13 PTX4 C16orf91 NARFL TMEM204 SLC9A3R2 SNORD60 WDR24 IGFALS LUC7L MIR3180-5 TPSAB1 CASKIN1 WASIR2 TMEM8A MIR4717 DDX11L10 UNKL BAIAP3 NUBP2 CEMP1 WDR90 MIR3178 LOC101929280 LOC105371045 PIGQ AMDHD2 SSTR5 MIR5587 HBA1 JMJD8 MIR6511B1 PGP TPSB2 RGS11 TPSG1 MCRIP2 LOC107987233 TELO2 ERVK13-1 MIR3177 LOC105371049 LOC107984876 LMF1-AS1 SNRNP25 NTN3 RHOT2 HAGHL TSR3 MIR6767 MPG DNASE1L2 ECI1 CLCN7 NOXO1 NME3 DECR2 MLST8 PRR25 METTL26 SNHG19 MEIOB LOC100287175 MAPK8IP3 CHTF18 GFER LMF1 WFIKKN1 CAPN15 LOC652276 METRN MRPS34 BRICD5 CCNF FAM234A GNPTG MIR6859-4 FBXL16 MSLN POLR3K MIR6768 MIR662 LINC00254 LOC106660606 HBA2 ZNF598 NPW C1QTNF8 FLJ42627 MRPL28 PDIA2 C16orf59 RHBDL1 AXIN1 RAB40C RNF151 CACNA1H HBZ RPUSD1 MIR4516 TSC2 HBM CRAMP1 CCDC154 HS3ST6 LINC00235 LOC105371184 PRSS29P NPRL3 LOC105371038 TRAF7 RAB11FIP3 RNPS1 PRSS27 EME2 LOC100134368 ARHGDIG SNHG9 RPL3L ABCA17P HN1L MIR1225 HAGH FAHD1 LOC105371046 RPS2 LOC105371047 PRR35 TBC1D24 SPSB3 RHBDF1 MIR940 HBQ1
esv3570031 Chr.16:243389 - 278107 on Build GRCh38 Gain FAM234A RGS11
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain TMEM8A RAB11FIP3 RPL23AP5 NME4 LOC100134368 ARHGDIG MRPL28 PDIA2 DECR2 FAM234A AXIN1 RGS11
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain ARHGDIG PDIA2 FAM234A AXIN1 RGS11
esv3637562 Chr.16:261769 - 271795 on Build GRCh38 Gain FAM234A RGS11
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss TMEM8A RAB11FIP3 RPL23AP5 NME4 LOC100134368 ARHGDIG MRPL28 PDIA2 DECR2 FAM234A AXIN1 RGS11

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More Information


Additional Information:

For this assay, SNP(s) [rs76735572] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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