Hs00265661_cn

• Gene Symbol: GALNT18
• Assay Reference Genome Location: Chr.11:11271174 on build GRCh38
• Cytoband: 11p15.4

Target Gene Details

• Entrez Gene ID: 374378
• Gene Name: polypeptide N-acetylgalactosaminyltransferase 18
• Gene Aliases: GALNACT18, GALNT15, GALNTL4, GalNAc-T15, GalNAc-T18
• Location: Chr.11:11270874-11622045 on Build GRCh38
• Assay Gene Location: Within Exon 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GALNT18	NM_198516.2	11	2215	NP_940918.2
	XM_006718224.2	10	2060	XP_006718287.1
	XM_011520068.2	11	1791	XP_011518370.1
	AB078147.1			BAD93179.1
	AJ626724.1			CAF25035.1
	AK055111.1	11	2197
	AK124690.1	1	3514
	BC037341.2	11	2204	AAH37341.3
	BC060864.1	11	2206	AAH60864.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv832064	Chr.11:11128217 - 11316356 on Build GRCh38	Gain	GALNT18
nsv483000	Chr.11:10678454 - 12678453 on Build GRCh38	Loss	MICALCL SNORD97 USP47 MRVI1 MICAL2 CSNK2A3 EIF4G2 MIR8070 LOC101928053 MIR4299 CTR9 LOC105376545 GALNT18 DKK3 ZBED5 TEAD1 ZBED5-AS1 MIR6124 PARVA LOC105376554
nsv509389	Chr.11:11214235 - 11286237 on Build GRCh38	Insertion	GALNT18
esv34098	Chr.11:11248654 - 11450079 on Build GRCh38	Loss	GALNT18 CSNK2A3
esv32920	Chr.11:11194328 - 11359745 on Build GRCh38	Gain+Loss	GALNT18 CSNK2A3

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)

protein glycosylation

Function(s)

polypeptide N-acetylgalactosaminyltransferase activity
carbohydrate binding
metal ion binding