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Gene Symbol
PIDD1
Assay Reference Genome
Location

Chr.11:800432 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00278228_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 55367

Gene Name:

 p53-induced death domain protein 1

Gene Aliases:

 LRDD, PIDD

Location:

 Chr.11:799179-809504 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 12 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIDD1 NM_145886.3 NP_665893.2
NM_145887.3 NP_665894.2
XM_005253005.4 XP_005253062.1
XM_005253006.4 XP_005253063.1
XM_005253007.3 XP_005253064.1
XM_005253008.4 XP_005253065.1
XM_011520209.2 XP_011518511.1
XM_011520210.2 XP_011518512.1
XM_011520211.2 XP_011518513.1
XM_011520212.1 XP_011518514.1
XM_011520213.2 XP_011518515.1
XM_017017993.1 XP_016873482.1
AB208832.1 BAD92069.1
AB208949.1 BAD92186.1
AB209529.1 BAD92766.1
AF229178.1 AAF69491.1
AF274972.1 AAG13461.1
AF465246.1 AAP97716.1
AK074893.1 BAC11272.1
AL833849.1 CAD38708.1
BC014904.1 AAH14904.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss SLC25A22 CHID1 PNPLA2 LOC171391 POLR2L PDDC1 CRACR2B CD151 CEND1 PIDD1 RPLP2 SNORA52 PANO1 TSPAN4
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss SCT CHID1 SIGIRR DRD4 MIR210HG LOC101059906 MIR6744 IRF7 PNPLA2 EPS8L2 LOC171391 MUC2 AP2A2 MUC5AC POLR2L PDDC1 CRACR2B MUC6 RPLP2 DEAF1 SNORA52 PANO1 LOC101927503 PHRF1 TOLLIP PTDSS2 RASSF7 SLC25A22 ANO9 B4GALNT4 MUC5B HRAS LOC143666 LMNTD2 PKP3 CDHR5 TALDO1 TMEM80 CD151 LRRC56 CEND1 PIDD1 MIR210 RNH1 TSPAN4
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain SLC25A22 CHID1 PNPLA2 LOC171391 AP2A2 POLR2L PDDC1 CRACR2B CD151 CEND1 PIDD1 RPLP2 SNORA52 PANO1 TSPAN4
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss SCT CHID1 SIGIRR DRD4 MIR210HG LOC101059906 MIR6744 IRF7 PNPLA2 EPS8L2 LOC171391 MUC2 AP2A2 MUC5AC POLR2L PDDC1 CRACR2B MUC6 RPLP2 DEAF1 SNORA52 PANO1 LOC101927503 PHRF1 TOLLIP PTDSS2 RASSF7 SLC25A22 ANO9 MUC5B HRAS LOC143666 LMNTD2 CDHR5 TALDO1 TMEM80 CD151 TOLLIP-AS1 LRRC56 CEND1 PIDD1 MIR210 RNH1 TSPAN4
nsv552870 Chr.11:743813 - 810882 on Build GRCh38 Loss TALDO1 SLC25A22 CEND1 PIDD1 RPLP2 LOC171391 PANO1 PDDC1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss SLC25A22 CHID1 PNPLA2 LOC171391 POLR2L PDDC1 CRACR2B CD151 CEND1 PIDD1 RPLP2 SNORA52 PANO1 TSPAN4
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion SCT CHID1 SIGIRR DRD4 MIR210HG LOC101059906 IRF7 PNPLA2 EPS8L2 LOC171391 AP2A2 POLR2L PDDC1 CRACR2B RPLP2 DEAF1 SNORA52 PANO1 PHRF1 PTDSS2 RASSF7 SLC25A22 ANO9 B4GALNT4 HRAS LOC143666 LMNTD2 PKP3 CDHR5 TALDO1 TMEM80 CD151 LRRC56 CEND1 PIDD1 MIR210 RNH1 TSPAN4
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain SLC25A22 CD151 CEND1 PIDD1 RPLP2 PNPLA2 LOC171391 SNORA52 PANO1 PDDC1 CRACR2B
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion SCT CHID1 DRD4 MIR210HG LOC101059906 IRF7 PNPLA2 EPS8L2 LOC171391 POLR2L PDDC1 CRACR2B RPLP2 DEAF1 SNORA52 PANO1 PHRF1 PTDSS2 RASSF7 SLC25A22 HRAS LOC143666 LMNTD2 CDHR5 TALDO1 TMEM80 CD151 LRRC56 CEND1 PIDD1 MIR210 RNH1 TSPAN4
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion SLC25A22 CHID1 PNPLA2 LOC171391 POLR2L PDDC1 CRACR2B TALDO1 CD151 CEND1 PIDD1 RPLP2 SNORA52 PANO1 TSPAN4

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More Information


Additional Information:

For this assay, SNP(s) [rs147405558] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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