Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 9138 |
Gene Name: | Rho guanine nucleotide exchange factor 1 |
Gene Aliases: |
GEF1, LBCL2, LSC, P115-RHOGEF, SUB1.5 |
Location: |
Chr.19:41883200-41907454 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ARHGEF1 | NM_004706.3 | 7 | 609 | NP_004697.2 |
| NM_198977.1 | 6 | 510 | NP_945328.1 | |
| NM_199002.1 | 7 | 634 | NP_945353.1 | |
| XM_005259386.4 | 7 | 961 | XP_005259443.1 | |
| XM_005259390.4 | 7 | 957 | XP_005259447.1 | |
| XM_011527468.2 | 7 | 957 | XP_011525770.1 | |
| BC005155.2 | 4 | 347 | AAH05155.2 | |
| BC011726.2 | 6 | 485 | AAH11726.1 | |
| BC034013.1 | 7 | 565 | AAH34013.2 | |
| BC067262.1 | 6 | 453 | AAH67262.1 | |
| BQ944132.1 | 7 | 722 | ||
| BT007421.1 | 4 | 323 | AAP36089.1 | |
| U64105.1 | 7 | 554 | AAB17896.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv520239 | Chr.19:41853387 - 42426852 on Build GRCh38 | Loss |
 LIPE
RPS19
LIPE-AS1
MIR6797
GRIK5
CD79A
CNFN
LOC100505585
LOC390937
MIR4323
MEGF8
POU2F2
ATP1A3
DEDD2
PRR19
TMEM145
CIC
LOC101930071
GSK3A
LOC100505622
MIR8077
RABAC1
ARHGEF1
ERF
ZNF574
PAFAH1B3
ZNF526
|
| nsv953580 | Chr.19:41888230 - 41997948 on Build GRCh38 | Deletion |
RABAC1
ARHGEF1
ATP1A3
LOC100505585
LOC390937
|
| nsv522854 | Chr.19:41613927 - 42426852 on Build GRCh38 | Gain |
CEACAM6
LIPE
RPS19
LIPE-AS1
MIR6797
GRIK5
CD79A
CNFN
LOC100505585
LOC390937
CEACAM7
CEACAM5
CEACAM4
MIR4323
MEGF8
POU2F2
ATP1A3
DEDD2
PRR19
TMEM145
CIC
LOC101930071
GSK3A
LOC100505622
MIR8077
DMRTC2
RABAC1
ARHGEF1
LYPD4
CEACAM3
ERF
ZNF574
PAFAH1B3
ZNF526
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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