Hs00287104_cn

• Gene Symbol: EDC4
• Assay Reference Genome Location: Chr.16:67877794 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 23644
• Gene Name: enhancer of mRNA decapping 4
• Gene Aliases: GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8
• Location: Chr.16:67873023-67884514 on Build GRCh38
• Assay Gene Location: Overlaps Exon 7 - Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EDC4	NM_014329.4			NP_055144.3
	AK128582.1	7	1236
	AK291049.1
	AK302563.1
	BC043616.1			AAH43616.1
	BC053598.1			AAH53598.1
	BC064567.1			AAH64567.1
	L26339.1			AAA21833.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	SLC9A5 TPPP3 MIR328 RANBP10 ZDHHC1 E2F4 C16orf86 SLC12A4 ENKD1 ELMO3 TSNAXIP1 LOC105369155 CTCF HSD11B2 NUTF2 AGRP DDX28 ATP6V0D1 CENPT CTRL EDC4 TRADD PSKH1 PLEKHG4 KIAA0895L GFOD2 PARD6A LRRC36 CARMIL2 LOC100505942 FBXL8 THAP11 LRRC29 DUS2 EXOC3L1 LOC107984813 LOC100131303 PSMB10 NRN1L DPEP3 HSF4 LCAT FAM65A FHOD1 NOL3 ACD TMEM208 DPEP2 KCTD19
nsv1844	Chr.16:67868325 - 67917356 on Build GRCh38	Deletion	NUTF2 EDC4 PSKH1 NRN1L
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	SLC9A5 TPPP3 MIR328 RANBP10 ZDHHC1 E2F4 C16orf86 SLC12A4 ENKD1 ELMO3 TSNAXIP1 LOC105369155 CTCF HSD11B2 NUTF2 AGRP C16orf70 DDX28 ATP6V0D1 CENPT CTRL EDC4 TRADD PSKH1 PLEKHG4 KIAA0895L GFOD2 PARD6A LRRC36 CARMIL2 LOC100505942 FBXL8 THAP11 B3GNT9 LRRC29 DUS2 EXOC3L1 LOC107984813 LOC100131303 PSMB10 NRN1L DPEP3 HSF4 LCAT FAM65A FHOD1 NOL3 ACD TMEM208 DPEP2 KCTD19

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA capping factor

Gene Ontology Categories:

Process(es)

biological_process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

protein binding