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See other CDT1 CNV Assays ›
Gene Symbol
CDT1
Assay Reference Genome
Location

Chr.16:88808187 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00292214_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 81620

Gene Name:

 chromatin licensing and DNA replication factor 1

Gene Aliases:

 DUP, RIS2

Location:

 Chr.16:88803778-88809258 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDT1 NM_030928.3 10 1604 NP_112190.2
AB053172.1 10 1604 BAB61878.1
AF070552.1 8 1143
AF321125.1 10 1575 AAG45181.1
BC000137.2 10 1566 AAH00137.2
BC008676.1 10 1442 AAH08676.1
BC008860.2 10 1497 AAH08860.2
BC009410.1 10 1560 AAH09410.1
BC014202.2 6 865 AAH14202.2
BC021126.1 8 1136
BC049205.1 8 1208 AAH49205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain CBFA2T3 CTU2 SLC22A31 APRT GALNS CDT1 LOC100129697 LINC00304 ZNF778 LOC105371409 LOC100289580 LOC107987238 LOC339059 CDH15 LOC400558 MIR4722 PIEZO1 TRAPPC2L ACSF3 PABPN1L LOC101927793
nsv457617 Chr.16:88801844 - 88829729 on Build GRCh38 Gain APRT GALNS LOC107987238 CDT1
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain SNAI3 CTU2 SNAI3-AS1 APRT GALNS RNF166 LOC100289580 LOC107987238 LOC339059 CDT1 MIR4722 PIEZO1
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain CBFA2T3 SLC22A31 APRT GALNS LOC100287036 CDT1 LOC100129697 LOC105371414 LINC00304 ZNF778 ANKRD11 LOC105371409 LOC100289580 LOC107987238 LOC339059 CDH15 LOC400558 PIEZO1 TRAPPC2L ACSF3 PABPN1L LOC101927793
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion CBFA2T3 LOC105371409 APRT GALNS LOC107987238 CDT1 LOC100129697 TRAPPC2L PABPN1L LOC101927793
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CBFA2T3 APRT GALNS CDT1 LOC100129697 LINC00304 LOC105371409 LOC107987238 CDH15 LOC400558 TRAPPC2L ACSF3 PABPN1L LOC101927793
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SNAI3-AS1 LOC100129697 CHMP1A FANCA DEF8 SNAI3 ZNF276 PRDM7 CDK10 LOC339059 CDH15 PIEZO1 SPATA2L LOC101927793 CTU2 APRT GALNS RNF166 MVD GAS8 ZNF778 ANKRD11 LOC107987238 LOC105371419 MIR4722 FAM157C RPL13 CBFA2T3 CDT1 AFG3L1P TUBB3 LINC00304 CENPBD1 CYBA LOC105371409 LOC100289580 CPNE7 MC1R TUBB8P7 SLC22A31 SPG7 LOC100287036 LOC101927817 DPEP1 LOC105371414 TCF25 SPIRE2 LOC107984817 GAS8-AS1 IL17C SNORD68 VPS9D1-AS1 LOC400558 URAHP TRAPPC2L SPATA33 ACSF3 DBNDD1 VPS9D1 PABPN1L
nsv1063441 Chr.16:88767066 - 88861882 on Build GRCh38 Loss APRT GALNS LOC107987238 CDT1 PIEZO1 TRAPPC2L
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss CBFA2T3 LOC105371409 APRT GALNS LOC107987238 CDT1 LOC100129697 PIEZO1 TRAPPC2L PABPN1L LOC101927793
nsv573718 Chr.16:88807259 - 88810716 on Build GRCh38 Loss APRT CDT1
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain CBFA2T3 APRT GALNS LOC107987238 CDT1 PIEZO1 TRAPPC2L PABPN1L LOC101927793
nsv573715 Chr.16:88804814 - 88808224 on Build GRCh38 Loss CDT1
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain CBFA2T3 CTU2 APRT GALNS CDT1 LOC100129697 LOC105371409 LOC100289580 LOC107987238 LOC339059 MIR4722 PIEZO1 TRAPPC2L PABPN1L LOC101927793
nsv573712 Chr.16:88796728 - 88809084 on Build GRCh38 Loss CDT1

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