Name: [Hs00294254_cn] [HCN3]
Creator: Thermo Fisher Scientific
Keywords: [HCN3] Assay, [hyperpolarization activated cyclic nucleotide gated potassium channel 3] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	57657
Gene Name:	hyperpolarization activated cyclic nucleotide gated potassium channel 3
Gene Aliases:	-
Location:	Chr.1:155277427-155289848 on Build GRCh38
Assay Gene Location:	Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HCN3	NM_020897.2	8	2629	NP_065948.1
	NR_073074.1	8	2496
	XM_011509816.2	8	3147	XP_011508118.1
	XM_011509817.2	7	2467	XP_011508119.1
	XM_011509818.2	7	1859	XP_011508120.1
	XM_017001918.1	7	1841	XP_016857407.1
	AB040968.2	8	2278	BAA96059.2
	AK055840.1	7	2684
	AK299333.1	8	2469
	BC000066.1	7	1857	AAH00066.1
	BC028024.1	5	1494	AAH28024.2

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv3032	Chr.1:155285619 - 155318185 on Build GRCh38	Insertion	PKLR HCN3 FDPS LOC105371451
nsv831636	Chr.1:155249432 - 155475073 on Build GRCh38	Loss	SCAMP3 RUSC1-AS1 RUSC1 PKLR HCN3 MIR555 CLK2 FAM189B FDPS ASH1L POU5F1P4 LOC105371451
esv33869	Chr.1:155253492 - 155948170 on Build GRCh38	Loss	SCAMP3 DAP3 SCARNA26A RUSC1 ARHGEF2 FAM189B ASH1L POU5F1P4 RIT1 MIR555 MSTO2P SNORA80E ASH1L-AS1 LOC100505728 SYT11 PKLR HCN3 FDPS MSTO1 YY1AP1 RUSC1-AS1 RXFP4 CLK2 SCARNA26B GON4L KIAA0907 SCARNA4 LOC105371451
nsv436027	Chr.1:155260761 - 155291532 on Build GRCh38	Insertion	SCAMP3 PKLR HCN3 CLK2
nsv952214	Chr.1:155279610 - 155304509 on Build GRCh38	Deletion	PKLR HCN3
esv2758971	Chr.1:155122502 - 155345016 on Build GRCh38	Gain	SLC50A1 SCAMP3 TRIM46 RUSC1 PKLR THBS3 DPM3 HCN3 FAM189B MIR92B EFNA1 FDPS ASH1L MUC1 GBAP1 RUSC1-AS1 MTX1 CLK2 GBA KRTCAP2 LOC105371451
esv23319	Chr.1:155257268 - 155292883 on Build GRCh38	Gain	SCAMP3 PKLR HCN3 CLK2