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See other ATP6V0C CNV Assays ›
Gene Symbol
ATP6V0C
Assay Reference Genome
Location

Chr.16:2519236 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00311664_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 527

Gene Name:

 ATPase H+ transporting V0 subunit c

Gene Aliases:

 ATP6C, ATP6L, ATPL, VATL, VPPC, Vma3

Location:

 Chr.16:2513726-2520223 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP6V0C NM_001198569.1 NP_001185498.1
NM_001694.3 NP_001685.1
AW161158.1
BC004537.2 AAH04537.1
BC007389.2 AAH07389.1
BC007759.2 AAH07759.1
BC009290.2 AAH09290.1
BI548787.1
BT007155.1 AAP35819.1
CR541930.1 CAG46728.1
CR541951.1 CAG46749.1
M62762.1 AAA60039.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication GNPTG LOC107984876 PRR25 RPUSD1 MIR940 UBE2I TRAF7 GNG13 TELO2 TPSB2 SNORA64 MIR3178 ATP6V0C MIR4516 LOC652276 LOC100287175 TBL3 NME3 KCTD5 TPSG1 LOC101929280 C16orf59 RPL23AP5 MPG NPRL3 TPSAB1 ABCA17P NTN3 RHBDF1 AMDHD2 HBQ1 MRPL28 LMF1-AS1 CASKIN1 LOC106660606 LOC107987233 HAGH RNPS1 HN1L ZNF598 LOC105371184 PTX4 MIR3177 SLC9A3R2 SNRNP25 LINC00235 IGFALS SSTR5 MSRB1 TBC1D24 NME4 MLST8 SYNGR3 LINC00254 RNF151 LOC105371045 RGS11 NHLRC4 HS3ST6 UNKL TSR3 FAHD1 CHTF18 MIR6768 SOX8 METTL26 SNORA10 MIR6767 CACNA1H NARFL MIR3677 CCDC154 ERVK13-1 LOC105371046 MEIOB MIR4717 SNHG19 JMJD8 CAPN15 LOC105371047 LOC729652 LOC105371038 HBA2 MRPS34 POLR3K C1QTNF8 DDX11L10 MIR3180-5 PDIA2 WFIKKN1 MIR6511B1 FBXL16 SNORA78 HBA1 BAIAP3 MSLN RAB26 NPW FLJ42627 WASIR2 GFER NOXO1 IFT140 DNASE1L2 WDR24 RAB40C PRSS27 NUBP2 SPSB3 AXIN1 TMEM204 PDPK1 RPL3L FAM173A EME2 MCRIP2 RPS2 LUC7L HAGHL CCNF RHOT2 MIR3176 LOC105371049 RHBDL1 SSTR5-AS1 CEMP1 PKD1 C16orf91 CRAMP1 TSC2 BRICD5 RAB11FIP3 PGP ABCA3 PIGQ LMF1 ARHGDIG SNHG9 HBM PRSS29P NDUFB10 MIR662 PRR35 ECI1 MIR5587 CCDC78 MIR1225 TMEM8A WDR90 HBZ LOC100134368 E4F1 STUB1 TPSD1 SNORD60 DECR2 MAPK8IP3 MIR6859-4 FAM234A NTHL1 CLCN7 METRN
esv2760067 Chr.16:2486824 - 2820535 on Build GRCh38 Gain+Loss PRSS21 PRSS27 SRRM2-AS1 PRSS33 CEMP1 TCEB2 TBC1D24 MIR3178 ATP6V0C ERVK13-1 PRSS41 PDPK1 LOC652276 AMDHD2 FLJ42627 KCTD5 SRRM2
nsv833122 Chr.16:2501717 - 2663937 on Build GRCh38 Loss ERVK13-1 PDPK1 LOC652276 AMDHD2 FLJ42627 CEMP1 TBC1D24 MIR3178 ATP6V0C
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain CCNF LOC729652 LOC105371049 CEMP1 MIR940 PKD1 TRAF7 MIR3180-5 TBC1D24 TSC2 MIR3178 MIR6511B1 ATP6V0C BRICD5 MLST8 MIR4516 RAB26 PGP LOC652276 ABCA3 DNASE1L2 ECI1 C16orf59 MIR1225 MIR6768 E4F1 MIR6767 ABCA17P NTN3 MIR3677 SNORD60 PDPK1 AMDHD2 CASKIN1 MIR4717 SNHG19 LOC106660606 RNPS1

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