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See other PCDHB16 CNV Assays ›
Gene Symbol
PCDHB16
Assay Reference Genome
Location

Chr.5:141182572 on build GRCh38
Cytoband
5q31.3
Assay ID Hs00327799_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57717

Gene Name:

 protocadherin beta 16

Gene Aliases:

 ME1, PCDH-BETA16, PCDH3X, PCDHB8a

Location:

 Chr.5:141181690-141186221 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCDHB16 NM_020957.3 1 883 NP_066008.2
AB046841.1 1 1174
AF217757.1 AAF81914.1
AI684744.1
AK056460.1 1 188
AY013878.1 AAK21988.1
BC036062.1 1 162 AAH36062.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv599919 Chr.5:141182193 - 141212836 on Build GRCh38 Loss PCDHB9 PCDHB12 PCDHB16 PCDHB10 PCDHB11
esv2759382 Chr.5:140777355 - 141449115 on Build GRCh38 Gain PCDHGA7 PCDHA13 PCDHGB3 PCDHA12 PCDHAC2 PCDHB15 PCDHB13 PCDHB6 LOC101926905 PCDHA5 PCDHA2 PCDHAC1 PCDHA3 PCDHGB8P PCDHGB2 PCDHGA8 PCDHGA5 PCDHGB4 PCDHGB7 PCDHGA12 PCDHGB5 SLC25A2 PCDHA10 PCDHGA11 PCDHB4 PCDHA1 PCDHB7 PCDHB11 PCDHGA3 PCDHA4 PCDHGB6 PCDHGA10 PCDHB9 TAF7 PCDHB16 PCDHB18P PCDHB2 PCDHA11 PCDHGA6 PCDHB17P PCDHA8 PCDHB10 PCDHB14 PCDHB3 PCDHA7 PCDHA6 PCDHB5 PCDHB8 PCDHGB1 PCDHGA1 PCDHA9 PCDHGA9 PCDHB19P PCDHB12 PCDHGA2 PCDHB1 PCDHGA4
nsv823266 Chr.5:141156966 - 141222863 on Build GRCh38 Gain PCDHB9 PCDHB13 PCDHB12 PCDHB16 PCDHB10 PCDHB8 PCDHB7 PCDHB14 PCDHB17P PCDHB11
nsv499084 Chr.5:141175152 - 141193769 on Build GRCh38 Gain PCDHB9 PCDHB16 PCDHB10 PCDHB8 PCDHB7
nsv5031 Chr.5:141177713 - 141202707 on Build GRCh38 Insertion PCDHB9 PCDHB16 PCDHB10 PCDHB8 PCDHB11
nsv428127 Chr.5:141016768 - 141319173 on Build GRCh38 Loss PCDHB9 PCDHB5 TAF7 PCDHB16 PCDHB18P PCDHB8 PCDHB2 PCDHB17P PCDHB15 PCDHB13 PCDHB19P PCDHB12 SLC25A2 PCDHB10 PCDHB6 PCDHB1 PCDHB4 PCDHB7 PCDHB14 LOC101926905 PCDHB11 PCDHB3
nsv471634 Chr.5:141106394 - 141258375 on Build GRCh38 Gain+Loss PCDHB9 PCDHB5 PCDHB16 PCDHB18P PCDHB8 PCDHB17P PCDHB15 PCDHB13 PCDHB19P PCDHB12 PCDHB10 PCDHB6 PCDHB4 PCDHB7 PCDHB14 PCDHB11
nsv509092 Chr.5:141155922 - 141192231 on Build GRCh38 Insertion PCDHB9 PCDHB16 PCDHB8 PCDHB7 PCDHB17P
nsv1031792 Chr.5:141167591 - 141196668 on Build GRCh38 Loss PCDHB9 PCDHB16 PCDHB10 PCDHB8 PCDHB7
dgv958e201 Chr.5:141174165 - 141215536 on Build GRCh38 Deletion PCDHB9 PCDHB13 PCDHB12 PCDHB16 PCDHB10 PCDHB8 PCDHB7 PCDHB11
esv2664767 Chr.5:141177668 - 141213756 on Build GRCh38 Deletion PCDHB9 PCDHB12 PCDHB16 PCDHB10 PCDHB8 PCDHB11
nsv599908 Chr.5:141139584 - 141250122 on Build GRCh38 Loss PCDHB9 PCDHB16 PCDHB18P PCDHB8 PCDHB17P PCDHB15 PCDHB13 PCDHB19P PCDHB12 PCDHB10 PCDHB6 PCDHB7 PCDHB14 PCDHB11

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