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See other PCDHB16 CNV Assays ›
Gene Symbol
PCDHB16
Assay Reference Genome
Location

Chr.5:141183715 on build GRCh38
Cytoband
5q31.3
Assay ID Hs00329060_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57717

Gene Name:

 protocadherin beta 16

Gene Aliases:

 ME1, PCDH-BETA16, PCDH3X, PCDHB8a

Location:

 Chr.5:141181690-141186221 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCDHB16 NM_020957.3 1 2026 NP_066008.2
AB046841.1 1 2317
AF217757.1 1 1156 AAF81914.1
AK056460.1 1 1331
AY013878.1 1 1156 AAK21988.1
BC036062.1 1 1305 AAH36062.1
D88794.1 1 227 BAA21564.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv599919 Chr.5:141182193 - 141212836 on Build GRCh38 Loss PCDHB10 PCDHB16 PCDHB12 PCDHB9 PCDHB11
esv2759382 Chr.5:140777355 - 141449115 on Build GRCh38 Gain PCDHGA7 PCDHGB4 PCDHGB5 PCDHA11 PCDHGB2 PCDHB15 TAF7 PCDHA4 PCDHA9 PCDHGB1 PCDHB9 PCDHB17P LOC101926905 PCDHGB6 PCDHB14 PCDHA10 PCDHA8 PCDHGB3 PCDHGA9 PCDHA7 PCDHB11 PCDHGA12 PCDHB10 PCDHB5 PCDHB1 PCDHGA11 PCDHB4 PCDHGB7 PCDHA2 PCDHB18P PCDHGA2 PCDHGA4 PCDHAC1 PCDHA3 PCDHGA10 PCDHAC2 PCDHB8 PCDHB7 PCDHB19P PCDHA5 PCDHB12 PCDHB6 PCDHGA3 PCDHA6 PCDHA12 PCDHGA5 PCDHA1 PCDHA13 SLC25A2 PCDHGA6 PCDHGA8 PCDHB13 PCDHB16 PCDHGB8P PCDHGA1 PCDHB3 PCDHB2
nsv823266 Chr.5:141156966 - 141222863 on Build GRCh38 Gain PCDHB10 PCDHB7 PCDHB14 PCDHB13 PCDHB16 PCDHB12 PCDHB9 PCDHB17P PCDHB8 PCDHB11
nsv499084 Chr.5:141175152 - 141193769 on Build GRCh38 Gain PCDHB10 PCDHB7 PCDHB16 PCDHB9 PCDHB8
nsv5031 Chr.5:141177713 - 141202707 on Build GRCh38 Insertion PCDHB10 PCDHB16 PCDHB9 PCDHB8 PCDHB11
nsv428127 Chr.5:141016768 - 141319173 on Build GRCh38 Loss PCDHB14 PCDHB8 SLC25A2 PCDHB11 PCDHB15 PCDHB10 PCDHB7 PCDHB19P PCDHB5 PCDHB1 PCDHB13 TAF7 PCDHB16 PCDHB4 PCDHB12 PCDHB6 PCDHB9 PCDHB3 PCDHB17P PCDHB2 PCDHB18P LOC101926905
nsv471634 Chr.5:141106394 - 141258375 on Build GRCh38 Gain+Loss PCDHB14 PCDHB8 PCDHB11 PCDHB15 PCDHB10 PCDHB7 PCDHB19P PCDHB5 PCDHB13 PCDHB16 PCDHB4 PCDHB12 PCDHB6 PCDHB9 PCDHB17P PCDHB18P
nsv509092 Chr.5:141155922 - 141192231 on Build GRCh38 Insertion PCDHB7 PCDHB16 PCDHB9 PCDHB17P PCDHB8
nsv1031792 Chr.5:141167591 - 141196668 on Build GRCh38 Loss PCDHB10 PCDHB7 PCDHB16 PCDHB9 PCDHB8
dgv958e201 Chr.5:141174165 - 141215536 on Build GRCh38 Deletion PCDHB10 PCDHB7 PCDHB13 PCDHB16 PCDHB12 PCDHB9 PCDHB8 PCDHB11
esv2664767 Chr.5:141177668 - 141213756 on Build GRCh38 Deletion PCDHB10 PCDHB16 PCDHB12 PCDHB9 PCDHB8 PCDHB11
nsv599908 Chr.5:141139584 - 141250122 on Build GRCh38 Loss PCDHB14 PCDHB8 PCDHB11 PCDHB15 PCDHB10 PCDHB7 PCDHB19P PCDHB13 PCDHB16 PCDHB12 PCDHB6 PCDHB9 PCDHB17P PCDHB18P

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