Hs00348798_cn

• Gene Symbol: STK19
• Assay Reference Genome Location: Chr.6:31979434 on build GRCh38
• Cytoband: 6p21.33

Target Gene Details

• Entrez Gene ID: 8859
• Gene Name: serine/threonine kinase 19
• Gene Aliases: D6S60, D6S60E, G11, HLA-RP1, RP1
• Location: Chr.6:31971175-31981446 on Build GRCh38
• Assay Gene Location: Overlaps Intron 4 - Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
STK19	NM_004197.1			NP_004188.1
	NM_032454.1			NP_115830.1
	NR_026717.1
	AK302111.1
	AK307198.1
	BC110347.1			AAI10348.1
	BC121128.1
	BC121129.1
	BC143833.1
	L26260.1			AAA20122.1
	X77386.1			CAA54565.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv601970	Chr.6:31970674 - 31980252 on Build GRCh38	Loss	STK19 DXO
dgv10463n54	Chr.6:31817661 - 32683279 on Build GRCh38	Loss	MIR1236 HSPA1B PPT2 HLA-DQB1 C4A AGER PRRT1 CYP21A1P C2-AS1 HLA-DRB1 HLA-DRB6 HLA-DQB1-AS1 EGFL8 TNXB ATF6B EHMT2 HCG23 MIR6721 FKBPL RNF5 NEU1 PBX2 SLC44A4 C6orf10 ZBTB12 SKIV2L HLA-DRA AGPAT1 CFB STK19 HLA-DQA1 PPT2-EGFL8 LOC100507547 TNXA SNORD52 NELFE C6orf48 HLA-DRB5 SNORD48 GPSM3 BTNL2 LOC101929163 MIR6833 HSPA1A CYP21A2 C2 C4B NOTCH4 DXO
nsv601971	Chr.6:31971488 - 32046679 on Build GRCh38	Gain	C4A TNXA CYP21A2 TNXB CYP21A1P STK19 C4B DXO
nsv428141	Chr.6:31903735 - 32125066 on Build GRCh38	Gain+Loss	TNXB ATF6B CFB STK19 MIR1236 C4A TNXA CYP21A2 C2 CYP21A1P NELFE C4B C2-AS1 DXO SKIV2L
nsv1126749	Chr.6:31457323 - 32594423 on Build GRCh38	Deletion	CSNK2B DDX39B MIR1236 HSPA1B DDX39B-AS1 TNF PPT2 ATP6V1G2-DDX39B HSPA1L SNORD84 C4A AGER PRRT1 MIR6832 CYP21A1P C2-AS1 PRRC2A LY6G5B AIF1 HLA-DRB1 HLA-DRB6 MSH5-SAPCD1 EGFL8 LY6G6D TNXB ATF6B NCR3 EHMT2 HCG23 MIR6721 BAG6 FKBPL APOM HCP5 RNF5 LOC102725068 NEU1 SNORD117 ATP6V1G2 VARS LTB PBX2 SLC44A4 C6orf10 ABHD16A ZBTB12 SKIV2L LST1 HLA-DRA AGPAT1 VWA7 LY6G6E SAPCD1-AS1 CFB STK19 CLIC1 PPT2-EGFL8 LOC100507547 LOC100287329 GPANK1 TNXA SNORA38 NFKBIL1 C6orf47 LTA SNORD52 MICB NELFE SAPCD1 C6orf48 MSH5 HLA-DRB5 SNORD48 DDAH2 LY6G6F GPSM3 BTNL2 LOC101929163 MIR6833 LSM2 HSPA1A HCG26 CYP21A2 C2 MCCD1 C4B MIR4646 NOTCH4 LY6G5C C6orf25 DXO LY6G6C
dgv10403n54	Chr.6:31312324 - 32049763 on Build GRCh38	Loss	CSNK2B DDX39B MIR1236 HSPA1B DDX39B-AS1 TNF ATP6V1G2-DDX39B HSPA1L SNORD84 C4A MIR6832 CYP21A1P C2-AS1 PRRC2A MICA LY6G5B AIF1 MSH5-SAPCD1 LY6G6D TNXB NCR3 EHMT2 BAG6 APOM HCP5 LOC102725068 NEU1 SNORD117 MIR6891 ATP6V1G2 VARS LTB SLC44A4 ABHD16A ZBTB12 SKIV2L LST1 VWA7 LY6G6E SAPCD1-AS1 CFB STK19 CLIC1 HLA-B LOC100287329 GPANK1 TNXA SNORA38 NFKBIL1 C6orf47 LTA SNORD52 MICB NELFE SAPCD1 C6orf48 MSH5 SNORD48 DDAH2 LY6G6F LSM2 HSPA1A HCG26 CYP21A2 C2 MCCD1 C4B MIR4646 LY6G5C C6orf25 DXO LY6G6C
nsv1073969	Chr.6:31456422 - 33480523 on Build GRCh38	Deletion	DDX39B-AS1 TNF PPT2 HLA-DQB1 HSPA1L AGER PRRT1 MIR6832 HLA-DRB6 HLA-DQB1-AS1 EGFL8 TNXB ATF6B NCR3 EHMT2 FKBPL APOM LOC102725068 ATP6V1G2 VARS HLA-DOA HLA-DMA SLC44A4 TAP1 ABHD16A MIR6873 HLA-DQA2 SKIV2L HLA-DQB2 HLA-DRA RPS18 TAPBP WDR46 CFB B3GALT4 CLIC1 SYNGAP1 LOC100507547 PFDN6 HLA-DOB TNXA SNORA38 SNORD52 MICB SAPCD1 MSH5 LOC100294145 HLA-DPA1 GPSM3 LOC101929163 MIR6833 HSPA1A SLC39A7 HLA-DMB PSMB8-AS1 MCCD1 MIR5004 NOTCH4 CSNK2B CUTA KIFC1 DDX39B MIR1236 HSPA1B ATP6V1G2-DDX39B DAXX SNORD84 C4A CYP21A1P C2-AS1 PRRC2A LY6G5B AIF1 HLA-DRB1 TAP2 MSH5-SAPCD1 LY6G6D HCG23 MIR6721 RGL2 BAG6 HCP5 RNF5 PSMB9 NEU1 SNORD117 LTB PBX2 ZBTB22 C6orf10 ZBTB12 LST1 AGPAT1 ZBTB9 VWA7 HLA-DPB2 LY6G6E PSMB8 BRD2 SAPCD1-AS1 STK19 HLA-DQA1 PPT2-EGFL8 LOC100287329 GPANK1 RXRB NFKBIL1 C6orf47 LTA MIR219A1 NELFE HCG25 PHF1 HSD17B8 C6orf48 HLA-DPB1 HLA-DRB5 SNORD48 HCG24 DDAH2 LY6G6F BTNL2 LSM2 PPP1R2P1 RING1 HCG26 CYP21A2 C2 COL11A2 MIR6834 C4B MIR4646 LY6G5C C6orf25 DXO VPS52 LY6G6C MIR3135B
nsv1112900	Chr.6:31455323 - 33480423 on Build GRCh38	Deletion	DDX39B-AS1 TNF PPT2 HLA-DQB1 HSPA1L AGER PRRT1 MIR6832 HLA-DRB6 HLA-DQB1-AS1 EGFL8 TNXB ATF6B NCR3 EHMT2 FKBPL APOM LOC102725068 ATP6V1G2 VARS HLA-DOA HLA-DMA SLC44A4 TAP1 ABHD16A MIR6873 HLA-DQA2 SKIV2L HLA-DQB2 HLA-DRA RPS18 TAPBP WDR46 CFB B3GALT4 CLIC1 SYNGAP1 LOC100507547 PFDN6 HLA-DOB TNXA SNORA38 SNORD52 MICB SAPCD1 MSH5 LOC100294145 HLA-DPA1 GPSM3 LOC101929163 MIR6833 HSPA1A SLC39A7 HLA-DMB PSMB8-AS1 MCCD1 MIR5004 NOTCH4 CSNK2B CUTA KIFC1 DDX39B MIR1236 HSPA1B ATP6V1G2-DDX39B DAXX SNORD84 C4A CYP21A1P C2-AS1 PRRC2A LY6G5B AIF1 HLA-DRB1 TAP2 MSH5-SAPCD1 LY6G6D HCG23 MIR6721 RGL2 BAG6 HCP5 RNF5 PSMB9 NEU1 SNORD117 LTB PBX2 ZBTB22 C6orf10 ZBTB12 LST1 AGPAT1 ZBTB9 VWA7 HLA-DPB2 LY6G6E PSMB8 BRD2 SAPCD1-AS1 STK19 HLA-DQA1 PPT2-EGFL8 LOC100287329 GPANK1 RXRB NFKBIL1 C6orf47 LTA MIR219A1 NELFE HCG25 PHF1 HSD17B8 C6orf48 HLA-DPB1 HLA-DRB5 SNORD48 HCG24 DDAH2 LY6G6F BTNL2 LSM2 PPP1R2P1 RING1 HCG26 CYP21A2 C2 COL11A2 MIR6834 C4B MIR4646 LY6G5C C6orf25 DXO VPS52 LY6G6C MIR3135B
nsv830628	Chr.6:31919777 - 31979823 on Build GRCh38	Loss	C2 CFB NELFE STK19 C2-AS1 MIR1236 DXO SKIV2L
dgv10404n54	Chr.6:31312550 - 32516591 on Build GRCh38	Loss	CSNK2B DDX39B MIR1236 HSPA1B DDX39B-AS1 TNF PPT2 ATP6V1G2-DDX39B HSPA1L SNORD84 C4A AGER PRRT1 MIR6832 CYP21A1P C2-AS1 PRRC2A MICA LY6G5B AIF1 MSH5-SAPCD1 EGFL8 LY6G6D TNXB ATF6B NCR3 EHMT2 HCG23 MIR6721 BAG6 FKBPL APOM HCP5 RNF5 LOC102725068 NEU1 SNORD117 MIR6891 ATP6V1G2 VARS LTB PBX2 SLC44A4 C6orf10 ABHD16A ZBTB12 SKIV2L LST1 HLA-DRA AGPAT1 VWA7 LY6G6E SAPCD1-AS1 CFB STK19 CLIC1 PPT2-EGFL8 HLA-B LOC100507547 LOC100287329 GPANK1 TNXA SNORA38 NFKBIL1 C6orf47 LTA SNORD52 MICB NELFE SAPCD1 C6orf48 MSH5 SNORD48 DDAH2 LY6G6F GPSM3 BTNL2 LOC101929163 MIR6833 LSM2 HSPA1A HCG26 CYP21A2 C2 MCCD1 C4B MIR4646 NOTCH4 LY6G5C C6orf25 DXO LY6G6C
nsv284	Chr.6:31957962 - 32028944 on Build GRCh38	Deletion	C4A TNXA CYP21A1P NELFE STK19 C4B DXO SKIV2L

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

Gene Ontology Categories:

Process(es)

protein phosphorylation

Function(s)

protein serine/threonine kinase activity
ATP binding