Hs00351965_cn

• Gene Symbol: EDC4
• Assay Reference Genome Location: Chr.16:67881126 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 23644
• Gene Name: enhancer of mRNA decapping 4
• Gene Aliases: GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8
• Location: Chr.16:67873023-67884514 on Build GRCh38
• Assay Gene Location: Within Exon 19

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EDC4	NM_014329.4	19	2821	NP_055144.3
	AK128582.1	18	3295
	AK291049.1	19	2589
	BC043616.1	19	2724	AAH43616.1
	BC053598.1	14	1961	AAH53598.1
	BC064567.1	19	2718	AAH64567.1
	L26339.1	19	2718	AAA21833.1
	U17474.1	9	1358	AAB51444.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	THAP11 LCAT TSNAXIP1 LRRC29 EXOC3L1 LOC105369155 C16orf86 ZDHHC1 RANBP10 FAM65A NUTF2 PARD6A NRN1L CARMIL2 HSF4 DUS2 DPEP3 NOL3 ELMO3 DPEP2 ATP6V0D1 EDC4 GFOD2 TPPP3 CTCF TMEM208 PLEKHG4 LOC100505942 FBXL8 AGRP CENPT PSMB10 SLC12A4 SLC9A5 TRADD E2F4 KCTD19 LOC100131303 CTRL LRRC36 FHOD1 HSD11B2 ACD LOC107984813 KIAA0895L DDX28 PSKH1 ENKD1 MIR328
nsv1844	Chr.16:67868325 - 67917356 on Build GRCh38	Deletion	NRN1L EDC4 PSKH1 NUTF2
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	THAP11 LCAT TSNAXIP1 LRRC29 EXOC3L1 LOC105369155 C16orf86 ZDHHC1 RANBP10 FAM65A NUTF2 PARD6A NRN1L CARMIL2 HSF4 B3GNT9 DUS2 DPEP3 NOL3 ELMO3 DPEP2 ATP6V0D1 EDC4 GFOD2 TPPP3 CTCF TMEM208 PLEKHG4 LOC100505942 FBXL8 AGRP CENPT PSMB10 SLC12A4 SLC9A5 TRADD E2F4 KCTD19 LOC100131303 CTRL LRRC36 FHOD1 C16orf70 HSD11B2 ACD LOC107984813 KIAA0895L DDX28 PSKH1 ENKD1 MIR328

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA capping factor

Gene Ontology Categories:

Process(es)

biological_process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

protein binding