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Gene Symbol
PIDD1
Assay Reference Genome
Location

Chr.11:801229 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00370952_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 55367

Gene Name:

 p53-induced death domain protein 1

Gene Aliases:

 LRDD, PIDD

Location:

 Chr.11:799179-809504 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 10 - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIDD1 NM_145886.3 NP_665893.2
NM_145887.3 NP_665894.2
XM_005253005.4 XP_005253062.1
XM_005253006.4 XP_005253063.1
XM_005253007.3 XP_005253064.1
XM_005253008.4 XP_005253065.1
XM_011520209.2 XP_011518511.1
XM_011520210.2 XP_011518512.1
XM_011520211.2 XP_011518513.1
XM_011520212.1 XP_011518514.1
XM_011520213.2 XP_011518515.1
XM_017017993.1 XP_016873482.1
AB208832.1 BAD92069.1
AB208949.1 BAD92186.1
AB209529.1 BAD92766.1
AF229178.1 AAF69491.1
AF274972.1 AAG13461.1
AF465246.1 AAP97716.1
AK074893.1 BAC11272.1
AL833849.1 CAD38708.1
BC014904.1 AAH14904.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss CRACR2B CD151 SNORA52 TSPAN4 RPLP2 PNPLA2 POLR2L CHID1 LOC171391 PIDD1 PANO1 SLC25A22 PDDC1 CEND1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss SIGIRR CD151 SNORA52 LRRC56 DRD4 HRAS EPS8L2 IRF7 AP2A2 CDHR5 LOC101927503 MUC6 PKP3 PHRF1 LOC143666 B4GALNT4 SLC25A22 PDDC1 MUC5B ANO9 MIR6744 CRACR2B LMNTD2 PTDSS2 TSPAN4 MIR210HG DEAF1 RNH1 RPLP2 PNPLA2 RASSF7 POLR2L CHID1 TOLLIP LOC101059906 LOC171391 MUC5AC PIDD1 TALDO1 MUC2 PANO1 CEND1 SCT TMEM80 MIR210
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CRACR2B CD151 SNORA52 TSPAN4 RPLP2 PNPLA2 POLR2L CHID1 LOC171391 AP2A2 PIDD1 PANO1 SLC25A22 PDDC1 CEND1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss SIGIRR CD151 TOLLIP-AS1 SNORA52 LRRC56 DRD4 HRAS EPS8L2 IRF7 AP2A2 CDHR5 LOC101927503 MUC6 PHRF1 LOC143666 SLC25A22 PDDC1 MUC5B ANO9 MIR6744 CRACR2B LMNTD2 PTDSS2 TSPAN4 MIR210HG DEAF1 RNH1 RPLP2 PNPLA2 RASSF7 POLR2L CHID1 TOLLIP LOC101059906 LOC171391 MUC5AC PIDD1 TALDO1 MUC2 PANO1 CEND1 SCT TMEM80 MIR210
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion SIGIRR CD151 SNORA52 LRRC56 DRD4 HRAS EPS8L2 IRF7 AP2A2 CDHR5 PKP3 PHRF1 LOC143666 B4GALNT4 SLC25A22 PDDC1 ANO9 CRACR2B LMNTD2 PTDSS2 TSPAN4 MIR210HG DEAF1 RNH1 RPLP2 PNPLA2 RASSF7 POLR2L CHID1 LOC101059906 LOC171391 PIDD1 TALDO1 PANO1 CEND1 SCT TMEM80 MIR210
nsv552870 Chr.11:743813 - 810882 on Build GRCh38 Loss PIDD1 RPLP2 TALDO1 PANO1 SLC25A22 PDDC1 CEND1 LOC171391
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CRACR2B CD151 SNORA52 TSPAN4 RPLP2 PNPLA2 POLR2L CHID1 LOC171391 PIDD1 PANO1 SLC25A22 PDDC1 CEND1
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain CRACR2B CD151 SNORA52 PIDD1 RPLP2 PNPLA2 PANO1 SLC25A22 PDDC1 CEND1 LOC171391
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion CD151 SNORA52 LRRC56 DRD4 HRAS EPS8L2 IRF7 CDHR5 PHRF1 LOC143666 SLC25A22 PDDC1 CRACR2B LMNTD2 PTDSS2 TSPAN4 MIR210HG DEAF1 RNH1 RPLP2 PNPLA2 RASSF7 POLR2L CHID1 LOC101059906 LOC171391 PIDD1 TALDO1 PANO1 CEND1 SCT TMEM80 MIR210
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CRACR2B CD151 SNORA52 TSPAN4 RPLP2 PNPLA2 POLR2L CHID1 LOC171391 PIDD1 TALDO1 PANO1 SLC25A22 PDDC1 CEND1

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More Information


Additional Information:

For this assay, SNP(s) [rs115365647] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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