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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2044670 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00417080_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 NP_001305122.1
NM_001318194.1 NP_001305123.1
NM_002528.6 NP_002519.1
XM_017023253.1 XP_016878742.1
AB001575.1 BAA19413.1
BC000391.2 AAH00391.2
BC003014.1 AAH03014.1
BE900738.1
BG468617.1
HY057336.1
U79718.1 AAB41534.1
U81285.1 AAC51136.1
Y09687.1 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PIGQ MEIOB STUB1 ZNF598 C1QTNF8 ARHGDIG ATP6V0C AXIN1 PRR35 HBM MIR6859-4 PRR25 GNPTG MAPK8IP3 RPUSD1 HBQ1 HN1L IFT140 SNORA78 RPL3L LOC106660606 MIR6767 FLJ42627 LUC7L PGP PKD1 WFIKKN1 NME4 LOC107984876 MLST8 TSR3 IGFALS ECI1 MIR3677 HBA1 SSTR5 LOC105371046 LOC652276 CCDC154 RAB11FIP3 BRICD5 NME3 METRN MIR3177 C16orf91 HAGH MSRB1 E4F1 SNORD60 SOX8 POLR3K SNHG9 FAM234A NPW CAPN15 NPRL3 WDR24 LOC729652 DNASE1L2 MIR3176 TPSAB1 MIR3180-5 HBA2 SNRNP25 DDX11L10 LOC100287175 LOC105371047 RPL23AP5 SYNGR3 CLCN7 LOC105371038 MIR5587 CACNA1H SPSB3 ABCA17P METTL26 TPSD1 PTX4 HAGHL SNORA10 UNKL SLC9A3R2 UBE2I CASKIN1 NHLRC4 MRPS34 TBC1D24 GFER NOXO1 SNORA64 RHBDF1 TPSB2 NUBP2 RNPS1 MIR3178 CRAMP1 MIR4717 LMF1-AS1 TSC2 MIR940 BAIAP3 EME2 CCNF TRAF7 MPG PRSS29P LINC00254 TMEM8A SSTR5-AS1 FAHD1 MIR6511B1 SNHG19 ABCA3 RGS11 MIR1225 KCTD5 TELO2 MRPL28 DECR2 JMJD8 GNG13 RNF151 FBXL16 NTHL1 TMEM204 TPSG1 NARFL C16orf59 LOC105371045 LOC105371049 RAB26 LOC107987233 RHBDL1 MSLN PDIA2 MCRIP2 CEMP1 RAB40C CCDC78 NDUFB10 LOC105371184 AMDHD2 LINC00235 RHOT2 LMF1 MIR4516 WDR90 FAM173A MIR662 HBZ ERVK13-1 WASIR2 LOC100134368 CHTF18 HS3ST6 NTN3 LOC101929280 TBL3 PRSS27 MIR6768 PDPK1 RPS2
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss NPW ZNF598 GFER NTHL1 NOXO1 SYNGR3 SLC9A3R2 TBL3 TSC2
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion ZNF598 RNF151 GFER NTHL1 MSRB1 NOXO1 SYNGR3 SNORA64 MIR4516 LOC105371049 SNHG9 MIR6511B1 NPW SNORA78 RPL3L SNORA10 HS3ST6 SLC9A3R2 MIR1225 TBL3 NDUFB10 PKD1 RPS2 TSC2
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion ZNF598 RNF151 GFER NTHL1 NOXO1 SYNGR3 SNORA64 LOC105371049 SNHG9 MIR6511B1 NPW SNORA78 SNORA10 SLC9A3R2 MIR1225 TBL3 NDUFB10 PKD1 RPS2 TSC2

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