Genomic Map
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Target Gene Details
Entrez Gene ID: | 56344 |
Gene Name: | calcium binding protein 5 |
Gene Aliases: |
CABP3 |
Location: |
Chr.19:48029383-48048342 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 1 - Exon 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CABP5 | XM_017026992.1 | XP_016882481.1 |
Target Gene Details
Entrez Gene ID: | 8605 |
Gene Name: | phospholipase A2 group IVC |
Gene Aliases: |
CPLA2-gamma |
Location: |
Chr.19:48047843-48111445 on Build GRCh38 |
Assay Gene Location: | Within Exon 21 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PLA2G4C | NM_001159322.1 | 17 | 2090 | NP_001152794.1 |
| NM_001159323.1 | 17 | 2164 | NP_001152795.1 | |
| NM_003706.2 | 17 | 2121 | NP_003697.2 | |
| XM_011527431.2 | 16 | 2660 | XP_011525733.1 | |
| XM_017027411.1 | 16 | 2703 | XP_016882900.1 | |
| XM_017027412.1 | 18 | 3143 | XP_016882901.1 | |
| XM_017027413.1 | 18 | 3186 | XP_016882902.1 | |
| AF058921.1 | 17 | 2032 | AAC32823.1 | |
| AF065214.1 | 17 | 2066 | AAC78835.1 | |
| AK022440.1 | 17 | 2094 | ||
| AK295400.1 | 17 | 2055 | ||
| AL050193.1 | 3 | 398 | CAB43312.3 | |
| BC063416.1 | 17 | 2104 | AAH63416.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv833853 | Chr.19:47982539 - 48184317 on Build GRCh38 | Loss |
 CABP5
LIG1
PLA2G4C
C19orf68
BSPH1
PLA2G4C-AS1
ELSPBP1
|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
KCNJ14
PRR12
KCNA7
PLA2G4C
IZUMO1
CPT1C
DBP
SNORD35B
RCN3
PTOV1-AS1
FUT1
SNAR-G2
CCDC155
CARD8
VRK3
ZNF114
GRWD1
TSKS
LOC105447645
CGB2
PPFIA3
AP2A1
NOSIP
CABP5
SNAR-D
LIG1
MED25
CGB8
MIR5088
SNAR-A6
RPL18
CA11
SNORD35A
SNAR-A7
NTN5
MIR4751
SIGLEC11
LOC101059948
CD37
PRRG2
PRMT1
SNRNP70
FAM83E
MIR4749
MIR6799
HRC
CARD8-AS1
CYTH2
PPP1R15A
DKKL1
SULT2B1
SNAR-A11
TULP2
LHB
PIH1D1
SNORD34
SNAR-B2
ADM5
AKT1S1
CGB7
MIR150
SNORD33
HSD17B14
SNAR-A2
LOC105372430
SLC17A7
PLEKHA4
SNAR-G1
LOC101928295
ATF5
LIN7B
RUVBL2
FUZ
IRF3
SYNGR4
RPL13A
BSPH1
SNORD32A
MIR4324
SNAR-C2
SPHK2
TRPM4
RASIP1
SNAR-A10
RRAS
PTOV1
SNAR-A3
SNAR-A1
LMTK3
PTH2
SNAR-A4
C19orf68
FTL
CGB5
SEC1P
GRIN2D
MIR6798
SNAR-A13
SNAR-A5
FLT3LG
ELSPBP1
FLJ26850
SIGLEC16
MAMSTR
SNAR-C3
SNAR-A9
BCAT2
BAX
ZNF473
NUCB1-AS1
GYS1
SLC6A16
C19orf73
CCDC114
SNAR-A8
DHDH
FGF21
MIR4750
PTOV1-AS2
NUCB1
BCL2L12
CGB1
PNKP
NUP62
SNAR-C1
SNAR-A14
SNAR-A12
GFY
LOC100287477
SNAR-C4
CGB3
TMEM143
IL4I1
ALDH16A1
NTF4
PLA2G4C-AS1
SNAR-B1
FCGRT
TEAD2
KDELR1
SCAF1
FUT2
MIR6800
RPS11
SNAR-C5
SPACA4
EMP3
TBC1D17
|
| esv34181 | Chr.19:48009377 - 48416682 on Build GRCh38 | Loss |
PLA2G4C
C19orf68
SYNGR4
GRIN2D
KDELR1
ELSPBP1
CABP5
LIG1
CARD8-AS1
CARD8
TMEM143
ZNF114
PLA2G4C-AS1
EMP3
CCDC114
|
| dgv3611n100 | Chr.19:48024325 - 48081406 on Build GRCh38 | Gain |
CABP5
PLA2G4C
PLA2G4C-AS1
ELSPBP1
|
| nsv1058785 | Chr.19:48004749 - 48075632 on Build GRCh38 | Gain |
CABP5
PLA2G4C
PLA2G4C-AS1
ELSPBP1
|
| nsv1062163 | Chr.19:48040339 - 48075632 on Build GRCh38 | Gain |
CABP5
PLA2G4C
PLA2G4C-AS1
|
| nsv2516 | Chr.19:48046715 - 48080669 on Build GRCh38 | Insertion |
CABP5
PLA2G4C
PLA2G4C-AS1
|
| esv3893228 | Chr.19:48002211 - 48072851 on Build GRCh38 | Loss |
CABP5
PLA2G4C
PLA2G4C-AS1
ELSPBP1
|
| nsv1058622 | Chr.19:47798576 - 48077885 on Build GRCh38 | Gain |
LINC01595
PLA2G4C
BSPH1
SULT2A1
SNAR-A13
SNAR-A2
ELSPBP1
CABP5
SNAR-C1
TPRX1
CRX
SNAR-A12
SNAR-C5
SNAR-C2
SNAR-C4
SNAR-C3
SNAR-A3
SNAR-A1
PLA2G4C-AS1
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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