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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31658636 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00434404_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 1 2137 NP_067007.3
AJ245433.1 1 2098 CAB51603.1
BC012950.1 1 2137 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LOC100287329 ATF6B TNF C2 HSPA1A NCR3 TNXA C4B NFKBIL1 PPT2 C6orf48 HLA-DRB5 MIR6721 LY6G6D SNORD52 PBX2 MIR1236 HSPA1B LSM2 DDX39B-AS1 HLA-DRA ATP6V1G2 MIR6832 CFB SKIV2L SLC44A4 SAPCD1-AS1 CSNK2B HSPA1L SNORA38 APOM NOTCH4 HCG26 SNORD84 LTA LY6G6C LY6G6F TNXB GPANK1 MIR4646 EGFL8 SAPCD1 VARS PPT2-EGFL8 ZBTB12 C6orf47 CYP21A1P LOC102725068 DDX39B LY6G6E CLIC1 ABHD16A C2-AS1 PRRC2A NEU1 STK19 MIR6833 DXO AGPAT1 HLA-DRB1 HLA-DRB6 LOC101929163 C4A MSH5-SAPCD1 HCG23 LOC100507547 CYP21A2 VWA7 LTB DDAH2 BTNL2 PRRT1 AGER C6orf10 MSH5 EHMT2 LY6G5B GPSM3 SNORD48 SNORD117 MCCD1 LY6G5C AIF1 HCP5 C6orf25 RNF5 BAG6 ATP6V1G2-DDX39B MICB FKBPL NELFE LST1
nsv601942 Chr.6:31607499 - 31664357 on Build GRCh38 Loss C6orf47 AIF1 BAG6 GPANK1 SNORA38 PRRC2A APOM MIR6832
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss LOC100287329 TNF C2 HSPA1A NCR3 TNXA C4B NFKBIL1 C6orf48 LY6G6D SNORD52 MICA MIR1236 HSPA1B LSM2 DDX39B-AS1 ATP6V1G2 MIR6832 CFB SKIV2L SLC44A4 SAPCD1-AS1 CSNK2B HSPA1L SNORA38 APOM HLA-B HCG26 SNORD84 LTA LY6G6C LY6G6F TNXB GPANK1 MIR4646 SAPCD1 VARS ZBTB12 C6orf47 CYP21A1P LOC102725068 DDX39B LY6G6E CLIC1 ABHD16A C2-AS1 PRRC2A NEU1 STK19 DXO C4A MSH5-SAPCD1 CYP21A2 VWA7 LTB DDAH2 MSH5 EHMT2 LY6G5B SNORD48 MIR6891 SNORD117 MCCD1 LY6G5C AIF1 HCP5 C6orf25 BAG6 ATP6V1G2-DDX39B MICB NELFE LST1
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion B3GALT4 LOC100287329 ATF6B HSPA1A HLA-DQA1 RING1 SLC39A7 MIR219A1 PPT2 PSMB8-AS1 C6orf48 HCG24 LY6G6D HLA-DMA RGL2 MIR1236 HSPA1B LSM2 DDX39B-AS1 ATP6V1G2 BRD2 MIR6832 SKIV2L SLC44A4 SAPCD1-AS1 CSNK2B SNORA38 APOM HLA-DQB1 NOTCH4 ZBTB22 HCG26 TAP1 HLA-DQA2 SNORD84 MIR6873 HLA-DQB1-AS1 GPANK1 KIFC1 MIR4646 EGFL8 SAPCD1 PPT2-EGFL8 HLA-DPB1 ZBTB12 CYP21A1P DDX39B CLIC1 NEU1 MIR6833 DXO AGPAT1 HLA-DRB1 C4A MSH5-SAPCD1 MIR5004 CYP21A2 PHF1 MIR6834 LTB DDAH2 HLA-DPA1 MSH5 EHMT2 LY6G5B PPP1R2P1 HSD17B8 SNORD117 TAP2 LY6G5C BAG6 ATP6V1G2-DDX39B MICB NELFE COL11A2 TNF C2 NCR3 TNXA C4B NFKBIL1 HLA-DRB5 MIR6721 DAXX SNORD52 PBX2 HLA-DRA PFDN6 HCG25 ZBTB9 CFB LOC100294145 HSPA1L SYNGAP1 PSMB9 LTA LY6G6C LY6G6F TNXB VARS C6orf47 RPS18 LOC102725068 LY6G6E ABHD16A HLA-DPB2 C2-AS1 PRRC2A HLA-DMB STK19 HLA-DRB6 HLA-DOA CUTA LOC101929163 HCG23 LOC100507547 HLA-DQB2 VWA7 BTNL2 PRRT1 AGER WDR46 C6orf10 HLA-DOB GPSM3 MIR3135B SNORD48 MCCD1 AIF1 HCP5 TAPBP RXRB C6orf25 RNF5 PSMB8 VPS52 FKBPL LST1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion B3GALT4 LOC100287329 ATF6B HSPA1A HLA-DQA1 RING1 SLC39A7 MIR219A1 PPT2 PSMB8-AS1 C6orf48 HCG24 LY6G6D HLA-DMA RGL2 MIR1236 HSPA1B LSM2 DDX39B-AS1 ATP6V1G2 BRD2 MIR6832 SKIV2L SLC44A4 SAPCD1-AS1 CSNK2B SNORA38 APOM HLA-DQB1 NOTCH4 ZBTB22 HCG26 TAP1 HLA-DQA2 SNORD84 MIR6873 HLA-DQB1-AS1 GPANK1 KIFC1 MIR4646 EGFL8 SAPCD1 PPT2-EGFL8 HLA-DPB1 ZBTB12 CYP21A1P DDX39B CLIC1 NEU1 MIR6833 DXO AGPAT1 HLA-DRB1 C4A MSH5-SAPCD1 MIR5004 CYP21A2 PHF1 MIR6834 LTB DDAH2 HLA-DPA1 MSH5 EHMT2 LY6G5B PPP1R2P1 HSD17B8 SNORD117 TAP2 LY6G5C BAG6 ATP6V1G2-DDX39B MICB NELFE COL11A2 TNF C2 NCR3 TNXA C4B NFKBIL1 HLA-DRB5 MIR6721 DAXX SNORD52 PBX2 HLA-DRA PFDN6 HCG25 ZBTB9 CFB LOC100294145 HSPA1L SYNGAP1 PSMB9 LTA LY6G6C LY6G6F TNXB VARS C6orf47 RPS18 LOC102725068 LY6G6E ABHD16A HLA-DPB2 C2-AS1 PRRC2A HLA-DMB STK19 HLA-DRB6 HLA-DOA CUTA LOC101929163 HCG23 LOC100507547 HLA-DQB2 VWA7 BTNL2 PRRT1 AGER WDR46 C6orf10 HLA-DOB GPSM3 MIR3135B SNORD48 MCCD1 AIF1 HCP5 TAPBP RXRB C6orf25 RNF5 PSMB8 VPS52 FKBPL LST1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LOC100287329 ATF6B TNF C2 HSPA1A NCR3 TNXA C4B NFKBIL1 PPT2 C6orf48 MIR6721 LY6G6D SNORD52 MICA PBX2 MIR1236 HSPA1B LSM2 DDX39B-AS1 HLA-DRA ATP6V1G2 MIR6832 CFB SKIV2L SLC44A4 SAPCD1-AS1 CSNK2B HSPA1L SNORA38 APOM HLA-B NOTCH4 HCG26 SNORD84 LTA LY6G6C LY6G6F TNXB GPANK1 MIR4646 EGFL8 SAPCD1 VARS PPT2-EGFL8 ZBTB12 C6orf47 CYP21A1P LOC102725068 DDX39B LY6G6E CLIC1 ABHD16A C2-AS1 PRRC2A NEU1 STK19 MIR6833 DXO AGPAT1 LOC101929163 C4A MSH5-SAPCD1 HCG23 LOC100507547 CYP21A2 VWA7 LTB DDAH2 BTNL2 PRRT1 AGER C6orf10 MSH5 EHMT2 LY6G5B GPSM3 SNORD48 MIR6891 SNORD117 MCCD1 LY6G5C AIF1 HCP5 C6orf25 RNF5 BAG6 ATP6V1G2-DDX39B MICB FKBPL NELFE LST1
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion C6orf47 LY6G5B LY6G6E ABHD16A CSNK2B SNORA38 PRRC2A APOM LY6G5C AIF1 BAG6 LY6G6F GPANK1 MIR4646 MIR6832
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss LOC100287329 TNF C6orf47 DDX39B NCR3 ABHD16A PRRC2A NFKBIL1 DDX39B-AS1 ATP6V1G2 MIR6832 LTB LY6G5B CSNK2B SNORA38 APOM SNORD117 MCCD1 LY6G5C AIF1 SNORD84 LTA BAG6 ATP6V1G2-DDX39B GPANK1 LST1

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