Hs00468789_cn

• Gene Symbol: ADAT3
• Assay Reference Genome Location: Chr.19:1912083 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 113179
• Gene Name: adenosine deaminase, tRNA specific 3
• Gene Aliases: FWP005, MRT36, MST121, MSTP121, S863-5, TAD3
• Location: Chr.19:1905372-1913447 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ADAT3	NM_138422.2	2	262	NP_612431.2
	BC011824.1	2	216	AAH11824.1
	HY030731.1	2	263

Target Gene Details

• Entrez Gene ID: 113178
• Gene Name: secretory carrier membrane protein 4
• Gene Aliases: SCAMP-4
• Location: Chr.19:1905374-1926013 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCAMP4	NM_079834.2			NP_524558.1
	AK074586.1			BAC11075.1
	AK074967.1			BAC11322.1
	AK092056.1			BAC03797.1
	AK307641.1
	AK307700.1
	BC011747.2			AAH11747.1
	BC016509.1			AAH16509.1
	BC062598.1			AAH62598.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3893156	Chr.19:1766738 - 2115791 on Build GRCh38	Loss	ONECUT3 MKNK2 MIR1909 SCAMP4 REXO1 CSNK1G2-AS1 LOC100288123 BTBD2 AP3D1 MOB3A CSNK1G2 ADAT3 ABHD17A ATP8B3 KLF16 IZUMO4
esv32942	Chr.19:1320268 - 1999205 on Build GRCh38	Gain+Loss	ONECUT3 APC2 RPS15 MIR1909 SCAMP4 MUM1 REXO1 NDUFS7 MEX3D CSNK1G2 DAZAP1 ADAT3 ABHD17A MBD3 ATP8B3 TCF3 KLF16 REEP6 C19orf25 GAMT PLK5 CSNK1G2-AS1 UQCR11 LOC100288123 BTBD2 ADAMTSL5 PCSK4
nsv470107	Chr.19:1782799 - 2100347 on Build GRCh38	Loss	MKNK2 MIR1909 SCAMP4 REXO1 CSNK1G2-AS1 LOC100288123 BTBD2 MOB3A CSNK1G2 ADAT3 ABHD17A ATP8B3 KLF16 IZUMO4
nsv1160560	Chr.19:1791100 - 1916393 on Build GRCh38	Deletion	MIR1909 ADAT3 SCAMP4 ABHD17A REXO1 ATP8B3 KLF16 LOC100288123
nsv953942	Chr.19:1371602 - 2057401 on Build GRCh38	Deletion	ONECUT3 APC2 RPS15 MIR1909 SCAMP4 MUM1 REXO1 NDUFS7 MEX3D CSNK1G2 DAZAP1 ADAT3 ABHD17A MBD3 ATP8B3 TCF3 KLF16 REEP6 C19orf25 GAMT PLK5 MKNK2 CSNK1G2-AS1 UQCR11 LOC100288123 BTBD2 ADAMTSL5 PCSK4
nsv1160561	Chr.19:1884553 - 2003982 on Build GRCh38	Deletion	ADAT3 SCAMP4 ABHD17A CSNK1G2-AS1 BTBD2 CSNK1G2

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

deaminase, transfer/carrier protein

Gene Ontology Categories:

Process(es)

tRNA modification
RNA modification
protein transport

Function(s)

zinc ion binding
deaminase activity