Hs00482224_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48044016 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4	1	39	NP_062829.1
	XM_017026992.1			XP_016882481.1
	AA318398.1	1	39
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	PLA2G4C BSPH1 PLA2G4C-AS1 LIG1 ELSPBP1 C19orf68 CABP5
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	FUT1 SNAR-A11 LOC101928295 HRC PLA2G4C-AS1 IRF3 SLC6A16 RCN3 C19orf68 SNORD35A RRAS VRK3 PTOV1-AS1 CGB8 ZNF473 TEAD2 BSPH1 ALDH16A1 MIR4749 MIR4751 CCDC155 SNAR-A8 LOC101059948 DKKL1 KCNA7 CGB5 SNORD34 SNAR-A9 SNAR-A14 LMTK3 SYNGR4 SNORD33 GFY TSKS KCNJ14 HSD17B14 RPS11 LHB SPHK2 GYS1 FAM83E CABP5 SULT2B1 SNAR-A6 IZUMO1 MIR5088 SNAR-A5 CYTH2 LOC105447645 SNORD32A CGB1 MAMSTR CGB2 BCAT2 SLC17A7 DHDH SNAR-A3 RPL13A TBC1D17 KDELR1 RASIP1 DBP GRWD1 CD37 SNAR-C2 ADM5 PTH2 MIR6800 CGB7 CA11 FLT3LG SPACA4 PLA2G4C SNAR-A12 TRPM4 SCAF1 FLJ26850 SNAR-C3 NTN5 LOC105372430 BCL2L12 TULP2 PRMT1 MED25 ZNF114 FUT2 PLEKHA4 CPT1C SNAR-G2 MIR4324 SNRNP70 MIR6798 PIH1D1 LIG1 ELSPBP1 FTL RPL18 SNAR-A10 PTOV1 PRR12 TMEM143 SNAR-A4 SNAR-B2 FCGRT CARD8-AS1 GRIN2D SNAR-A7 SNAR-D PNKP NTF4 BAX CARD8 AKT1S1 IL4I1 FUZ NUP62 SNAR-A2 PPFIA3 EMP3 C19orf73 CGB3 PTOV1-AS2 MIR6799 NUCB1-AS1 SNAR-C4 NUCB1 CCDC114 LOC100287477 SIGLEC16 PPP1R15A MIR150 SEC1P SIGLEC11 SNAR-C1 SNAR-C5 LIN7B MIR4750 PRRG2 FGF21 SNAR-A1 RUVBL2 SNAR-G1 SNAR-B1 AP2A1 SNORD35B ATF5 NOSIP SNAR-A13
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	PLA2G4C PLA2G4C-AS1 LIG1 ELSPBP1 EMP3 C19orf68 CABP5 TMEM143 KDELR1 CARD8-AS1 GRIN2D ZNF114 CARD8 CCDC114 SYNGR4
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5
nsv1062163	Chr.19:48040339 - 48075632 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5
esv2619667	Chr.19:48043334 - 48044098 on Build GRCh38	Insertion	CABP5
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	PLA2G4C BSPH1 SNAR-A12 SNAR-C1 PLA2G4C-AS1 SNAR-A3 ELSPBP1 SNAR-C5 SNAR-C3 LINC01595 CABP5 SNAR-A1 CRX SNAR-C2 SNAR-C4 SULT2A1 TPRX1 SNAR-A13 SNAR-A2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding