Hs00494331_cn

• Gene Symbol: U2AF2
• Assay Reference Genome Location: Chr.19:55663618 on build GRCh38
• Cytoband: 19q13.42

Target Gene Details

• Entrez Gene ID: 11338
• Gene Name: U2 small nuclear RNA auxiliary factor 2
• Gene Aliases: U2AF65
• Location: Chr.19:55654050-55674716 on Build GRCh38
• Assay Gene Location: Overlaps Intron 8 - Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
U2AF2	NM_001012478.1			NP_001012496.1
	NM_007279.2			NP_009210.1
	XM_006722994.2			XP_006723057.1
	XM_011526410.1			XP_011524712.1
	AB451261.1
	AB451387.1
	BC008740.2			AAH08740.1
	BC030574.2			AAH30574.1
	X64044.1			CAA45409.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1061024	Chr.19:55655735 - 55705993 on Build GRCh38	Gain	EPN1 U2AF2
nsv953625	Chr.19:55637035 - 55699834 on Build GRCh38	Deletion	LOC107983998 ZNF581 ZNF580 CCDC106 EPN1 U2AF2
nsv833882	Chr.19:55647267 - 55815198 on Build GRCh38	Loss	RFPL4AL1 NLRP9 NLRP11 RFPL4A CCDC106 EPN1 U2AF2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome
termination of RNA polymerase II transcription
mRNA processing
RNA export from nucleus
mRNA export from nucleus
mRNA 3'-end processing
positive regulation of RNA splicing
negative regulation of mRNA splicing, via spliceosome
regulation of mitophagy
positive regulation of protein targeting to mitochondrion

Function(s)

nucleotide binding
protein binding
poly-pyrimidine tract binding
enzyme binding
pre-mRNA 3'-splice site binding
poly(A) RNA binding