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See other PCDHB16 CNV Assays ›
Gene Symbol
PCDHB16
Assay Reference Genome
Location

Chr.5:141183870 on build GRCh38
Cytoband
5q31.3
Assay ID Hs00495070_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57717

Gene Name:

 protocadherin beta 16

Gene Aliases:

 ME1, PCDH-BETA16, PCDH3X, PCDHB8a

Location:

 Chr.5:141181690-141186221 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCDHB16 NM_020957.3 1 2181 NP_066008.2
AB046841.1 1 2472
AF217757.1 1 1311 AAF81914.1
AK056460.1 1 1486
AY013878.1 1 1311 AAK21988.1
BC036062.1 1 1460 AAH36062.1
D88794.1 BAA21564.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv599919 Chr.5:141182193 - 141212836 on Build GRCh38 Loss PCDHB10 PCDHB12 PCDHB16 PCDHB11 PCDHB9
esv2730844 Chr.5:141183869 - 141194030 on Build GRCh38 Deletion PCDHB10 PCDHB16 PCDHB9
nsv823266 Chr.5:141156966 - 141222863 on Build GRCh38 Gain PCDHB10 PCDHB17P PCDHB13 PCDHB12 PCDHB7 PCDHB8 PCDHB16 PCDHB11 PCDHB14 PCDHB9
nsv5031 Chr.5:141177713 - 141202707 on Build GRCh38 Insertion PCDHB10 PCDHB8 PCDHB16 PCDHB11 PCDHB9
nsv428127 Chr.5:141016768 - 141319173 on Build GRCh38 Loss PCDHB5 PCDHB10 PCDHB4 PCDHB1 PCDHB12 PCDHB7 PCDHB2 PCDHB15 PCDHB8 PCDHB19P LOC101926905 TAF7 SLC25A2 PCDHB3 PCDHB11 PCDHB6 PCDHB9 PCDHB17P PCDHB13 PCDHB18P PCDHB16 PCDHB14
nsv471634 Chr.5:141106394 - 141258375 on Build GRCh38 Gain+Loss PCDHB5 PCDHB10 PCDHB4 PCDHB12 PCDHB7 PCDHB15 PCDHB8 PCDHB19P PCDHB11 PCDHB6 PCDHB9 PCDHB17P PCDHB13 PCDHB18P PCDHB16 PCDHB14
nsv509092 Chr.5:141155922 - 141192231 on Build GRCh38 Insertion PCDHB17P PCDHB7 PCDHB8 PCDHB16 PCDHB9
nsv1031792 Chr.5:141167591 - 141196668 on Build GRCh38 Loss PCDHB10 PCDHB7 PCDHB8 PCDHB16 PCDHB9
dgv958e201 Chr.5:141174165 - 141215536 on Build GRCh38 Deletion PCDHB10 PCDHB13 PCDHB12 PCDHB7 PCDHB8 PCDHB16 PCDHB11 PCDHB9
nsv599908 Chr.5:141139584 - 141250122 on Build GRCh38 Loss PCDHB10 PCDHB12 PCDHB7 PCDHB15 PCDHB8 PCDHB19P PCDHB11 PCDHB6 PCDHB9 PCDHB17P PCDHB13 PCDHB18P PCDHB16 PCDHB14
esv2759382 Chr.5:140777355 - 141449115 on Build GRCh38 Gain PCDHB5 PCDHGB7 PCDHGA6 PCDHB7 PCDHB15 PCDHB8 SLC25A2 PCDHGB6 PCDHA8 PCDHA2 PCDHGA9 PCDHGA12 PCDHGA3 PCDHA3 PCDHB14 PCDHGB8P PCDHGA8 PCDHB11 PCDHB6 PCDHA6 PCDHGB3 PCDHA1 PCDHGA11 PCDHB10 PCDHB4 PCDHGA5 PCDHB1 PCDHB12 TAF7 PCDHGA7 PCDHA13 PCDHGA1 PCDHB13 PCDHGB4 PCDHB16 PCDHGA4 PCDHAC1 PCDHA7 PCDHAC2 PCDHB2 PCDHB19P LOC101926905 PCDHB3 PCDHGA2 PCDHB9 PCDHB17P PCDHA5 PCDHA10 PCDHGB1 PCDHB18P PCDHA9 PCDHA11 PCDHGB5 PCDHGB2 PCDHA12 PCDHGA10 PCDHA4
nsv499084 Chr.5:141175152 - 141193769 on Build GRCh38 Gain PCDHB10 PCDHB7 PCDHB8 PCDHB16 PCDHB9
esv2664767 Chr.5:141177668 - 141213756 on Build GRCh38 Deletion PCDHB10 PCDHB12 PCDHB8 PCDHB16 PCDHB11 PCDHB9

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