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Gene Symbol
SPON2
Assay Reference Genome
Location

Chr.4:1170551 on build GRCh38
Cytoband
4p16.3
Assay ID Hs00498213_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10417

Gene Name:

 spondin 2

Gene Aliases:

 DIL-1, DIL1, M-SPONDIN, MINDIN

Location:

 Chr.4:1166932-1208962 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPON2 NM_001128325.2 NP_001121797.1
NM_001199021.1 NP_001185950.1
NM_012445.3 NP_036577.1
AB027466.1 BAA85892.1
AK024499.1 2 678 BAB15789.1
AK074618.1 BAC11092.1
AK074770.1 BAC11196.1
AK130164.1
AY358948.1 AAQ89307.1
BC002707.2 AAH02707.1
BC036341.1 AAH36341.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv822425 Chr.4:546316 - 1420011 on Build GRCh38 Loss GAK ATP5I MFSD7 LOC101928548 SPON2 TMED11P PCGF3 IDUA LOC105374344 LOC100130872 CPLX1 CRIPAK UVSSA CTBP1 LOC107986211 TMEM175 CTBP1-AS PDE6B DGKQ RNF212 CTBP1-AS2 LOC101928521 NKX1-1 MYL5 LOC100129917 FGFRL1 SLC26A1 MAEA
nsv593278 Chr.4:1165892 - 1421910 on Build GRCh38 Loss CTBP1 NKX1-1 LOC101928548 LOC100130872 SPON2 CTBP1-AS CRIPAK MAEA CTBP1-AS2 UVSSA
nsv950331 Chr.4:1164113 - 1239212 on Build GRCh38 Deletion CTBP1 LOC101928548 LOC100130872 SPON2 CTBP1-AS
nsv519106 Chr.4:1165203 - 1181073 on Build GRCh38 Loss SPON2
nsv1012892 Chr.4:1093083 - 1182842 on Build GRCh38 Loss LOC105374344 SPON2 TMED11P RNF212
nsv829835 Chr.4:1103798 - 1310451 on Build GRCh38 Gain CTBP1 LOC105374344 LOC101928548 LOC100130872 SPON2 CTBP1-AS TMED11P MAEA RNF212 CTBP1-AS2

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More Information


Additional Information:

For this assay, SNP(s) [rs140283251] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

cell adhesion molecule

Gene Ontology Categories:

Function(s) Process(es)


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