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See other TTLL10 CNV Assays ›
Gene Symbol
TTLL10
Assay Reference Genome
Location

Chr.1:1185544 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00498425_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 254173

Gene Name:

 tubulin tyrosine ligase like 10

Gene Aliases:

 TTLL5

Location:

 Chr.1:1173709-1197936 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TTLL10 NM_001130045.1 NP_001123517.1
NM_153254.2 9 1794 NP_694986.2
XM_005244738.1 XP_005244795.1
XM_011541177.2 XP_011539479.1
XM_017000906.1 XP_016856395.1
XM_017000908.1 XP_016856397.1
XM_017000909.1 XP_016856398.1
XM_017000910.1 11 1823 XP_016856399.1
XM_017000911.1 XP_016856400.1
XM_017000912.1 XP_016856401.1
AK093438.1 9 1794 BAC04164.1
AK124125.1 BAC85781.1
BC126152.1
BC126154.1
BX117374.1 1 358

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LINC00115 FAM87B AURKAIP1 LOC100134822 LOC102724312 NOC2L UBE2J2 FAM41C MRPL20 PLEKHN1 LOC100129534 OR4F5 ATAD3B MTND2P28 OR4F16 SAMD11 FAM132A LINC01342 LOC284600 LOC100132287 TNFRSF4 FAM138A GNB1 AGRN CCNL2 MIR1302-2 NADK LOC107985728 LOC105378591 LOC148413 LOC100130417 MIR6727 SCNN1D MIR429 RNF223 HES4 CPTP ISG15 PUSL1 KLHL17 MIR6723 CDK11A LOC105378589 MTND1P23 LOC107985729 MMP23A B3GALT6 TMEM88B LOC100506504 MIR6859-1 SLC35E2 MIB2 C1orf159 SLC35E2B SSU72 LINC01128 TMEM52 DDX11L1 LOC101928626 ATAD3A SKI MIR200A LOC105378948 LOC107984841 TNFRSF18 LOC100288175 PERM1 MIR6808 CFAP74 ACAP3 CALML6 TTLL10-AS1 FNDC10 MMP23B ANKRD65 ATAD3C MORN1 LOC105378947 WASH7P PRKCZ DVL1 LOC105378592 LOC100288069 MIR200B MIR6726 TMEM240 LOC100287934 OR4F29 MXRA8 LOC105378949 FAAP20 CDK11B SDF4 TAS1R3 LOC729737 GABRD LOC102725121 CPSF3L VWA1 MIR6859-2 TTLL10 LOC100133331
nsv544954 Chr.1:1139244 - 1186414 on Build GRCh38 Loss LINC01342 TTLL10 TTLL10-AS1 MIR429 MIR200A MIR200B
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain LINC01342 SCNN1D TNFRSF4 TTLL10-AS1 SDF4 MIR429 MIR200B RNF223 B3GALT6 UBE2J2 TTLL10 MIR200A LOC105378948 TNFRSF18 C1orf159 FAM132A
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss LINC01342 ACAP3 SCNN1D TNFRSF4 TTLL10-AS1 SDF4 MIR429 MIR200B MIR6726 RNF223 B3GALT6 UBE2J2 TTLL10 MIR200A TNFRSF18 C1orf159 FAM132A
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss B3GALT6 TNFRSF4 TTLL10 TTLL10-AS1 SDF4 TNFRSF18
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC100130417 MIR429 MIR200B RNF223 HES4 NOC2L FAM41C PLEKHN1 ISG15 KLHL17 SAMD11 MIR200A LOC105378948 TNFRSF18 LOC100288175 PERM1 LINC01342 LOC284600 TNFRSF4 TTLL10-AS1 SDF4 AGRN TTLL10 LOC107985728 C1orf159
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR6727 SCNN1D MIR429 MIR200B MIR6726 RNF223 CPTP UBE2J2 PUSL1 MIR200A LOC105378948 TNFRSF18 FAM132A LOC100288175 LINC01342 ACAP3 TNFRSF4 TTLL10-AS1 SDF4 TAS1R3 AGRN B3GALT6 CPSF3L TTLL10 C1orf159
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LINC00115 FAM87B AURKAIP1 SLC35E2B SSU72 LINC01128 LOC102724312 NOC2L UBE2J2 ATAD3A FAM41C MRPL20 PLEKHN1 ATAD3B SAMD11 MIR200A LOC105378948 TNFRSF18 FAM132A LOC100288175 PERM1 LINC01342 LOC284600 MIR6808 ACAP3 TNFRSF4 TTLL10-AS1 FNDC10 AGRN MMP23B CCNL2 ANKRD65 ATAD3C NADK LOC107985728 LOC148413 LOC100130417 DVL1 MIR6727 SCNN1D LOC100288069 MIR429 MIR200B MIR6726 RNF223 TMEM240 HES4 CPTP ISG15 PUSL1 LOC100287934 KLHL17 CDK11A MXRA8 CDK11B LOC107985729 SDF4 MMP23A TAS1R3 B3GALT6 TMEM88B CPSF3L VWA1 TTLL10 SLC35E2 MIB2 C1orf159
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion AURKAIP1 LOC148413 SSU72 DVL1 MIR6727 SCNN1D MIR429 MIR200B MIR6726 LOC102724312 TMEM240 CPTP UBE2J2 ATAD3A MRPL20 PUSL1 ATAD3B MIR200A TNFRSF18 FAM132A MXRA8 LINC01342 MIR6808 CDK11B LOC107985729 ACAP3 TNFRSF4 TTLL10-AS1 SDF4 TAS1R3 FNDC10 B3GALT6 MMP23B CCNL2 TMEM88B ANKRD65 ATAD3C CPSF3L VWA1 TTLL10 MIB2 C1orf159
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LINC00115 FAM87B LOC100130417 LINC01128 MIR429 MIR200B RNF223 HES4 NOC2L UBE2J2 FAM41C PLEKHN1 ISG15 KLHL17 SAMD11 MIR200A LOC105378948 TNFRSF18 FAM132A LOC100288175 PERM1 LINC01342 LOC284600 TNFRSF4 TTLL10-AS1 SDF4 AGRN B3GALT6 TTLL10 LOC107985728 C1orf159
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain AURKAIP1 LOC148413 LOC100130417 DVL1 MIR6727 SCNN1D MIR429 MIR200B MIR6726 RNF223 HES4 CPTP NOC2L UBE2J2 MRPL20 PLEKHN1 ISG15 PUSL1 KLHL17 SAMD11 MIR200A LOC105378948 TNFRSF18 FAM132A LOC100288175 MXRA8 PERM1 LINC01342 LOC284600 MIR6808 ACAP3 TNFRSF4 TTLL10-AS1 SDF4 TAS1R3 AGRN B3GALT6 CCNL2 TMEM88B ANKRD65 CPSF3L TTLL10 LOC107985728 C1orf159
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion PERM1 LINC01342 TNFRSF4 TTLL10-AS1 SDF4 MIR429 MIR200B RNF223 HES4 AGRN NOC2L PLEKHN1 ISG15 KLHL17 SAMD11 TTLL10 MIR200A LOC105378948 TNFRSF18 C1orf159 LOC100288175
nsv509257 Chr.1:1151955 - 1189470 on Build GRCh38 Insertion TTLL10 TTLL10-AS1 MIR429 MIR200A MIR200B
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain ACAP3 MIR6727 SCNN1D TNFRSF4 TTLL10-AS1 SDF4 MIR429 MIR200B MIR6726 B3GALT6 UBE2J2 CPSF3L PUSL1 TTLL10 MIR200A TNFRSF18 FAM132A

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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