Name: [Hs00515288_cn] [HCN3]
Creator: Thermo Fisher Scientific
Keywords: [HCN3] Assay, [hyperpolarization activated cyclic nucleotide gated potassium channel 3] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	57657
Gene Name:	hyperpolarization activated cyclic nucleotide gated potassium channel 3
Gene Aliases:	-
Location:	Chr.1:155277427-155289848 on Build GRCh38
Assay Gene Location:	Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HCN3	NM_020897.2	8	2793	NP_065948.1
	XM_011509816.2	8	3311	XP_011508118.1
	XM_011509817.2	7	2631	XP_011508119.1
	XM_011509818.2	7	2023	XP_011508120.1
	XM_017001918.1	7	2005	XP_016857407.1
	AB040968.2	8	2442	BAA96059.2
	AK055840.1
	BC000066.1	7	2021	AAH00066.1
	BC028024.1	5	1658	AAH28024.2

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv3032	Chr.1:155285619 - 155318185 on Build GRCh38	Insertion	HCN3 LOC105371451 PKLR FDPS
nsv831636	Chr.1:155249432 - 155475073 on Build GRCh38	Loss	HCN3 LOC105371451 RUSC1 PKLR MIR555 FAM189B ASH1L RUSC1-AS1 CLK2 SCAMP3 POU5F1P4 FDPS
esv33869	Chr.1:155253492 - 155948170 on Build GRCh38	Loss	LOC100505728 SYT11 MSTO2P RIT1 SNORA80E HCN3 LOC105371451 ARHGEF2 RXFP4 FAM189B GON4L RUSC1 PKLR SCARNA4 MSTO1 ASH1L KIAA0907 YY1AP1 CLK2 DAP3 SCARNA26A ASH1L-AS1 MIR555 RUSC1-AS1 SCAMP3 POU5F1P4 SCARNA26B FDPS
nsv436027	Chr.1:155260761 - 155291532 on Build GRCh38	Insertion	HCN3 PKLR CLK2 SCAMP3
nsv952214	Chr.1:155279610 - 155304509 on Build GRCh38	Deletion	HCN3 PKLR
esv2758971	Chr.1:155122502 - 155345016 on Build GRCh38	Gain	MUC1 RUSC1 SLC50A1 PKLR ASH1L GBA CLK2 EFNA1 TRIM46 HCN3 LOC105371451 FAM189B MIR92B THBS3 RUSC1-AS1 KRTCAP2 SCAMP3 GBAP1 MTX1 DPM3 FDPS
esv23319	Chr.1:155257268 - 155292883 on Build GRCh38	Gain	HCN3 PKLR CLK2 SCAMP3