Hs00529937_cn

• Gene Symbol: SOX21
• Assay Reference Genome Location: Chr.13:94711835 on build GRCh38
• Cytoband: 13q32.1

Target Gene Details

• Entrez Gene ID: 11166
• Gene Name: SRY-box 21
• Gene Aliases: SOX25
• Location: Chr.13:94709622-94712543 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SOX21	NM_007084.3	1	709	NP_009015.1
	AI569726.1	1	159
	AI816765.1	1	184
	CX869660.1	1	193
	DB493621.1	1	260
	X65666.1			CAA46617.1
	X71136.1	1	182	CAA50466.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1070605	Chr.13:94711245 - 94714046 on Build GRCh38	Deletion	SOX21 SOX21-AS1
nsv832686	Chr.13:94554488 - 94748738 on Build GRCh38	Gain	SOX21 SOX21-AS1 LOC101927248 GPR180 TGDS
esv28079	Chr.13:94710850 - 94713584 on Build GRCh38	Loss	SOX21 SOX21-AS1
esv34004	Chr.13:94254283 - 94740390 on Build GRCh38	Loss	SOX21 DCT SOX21-AS1 LOC101927248 GPC6 GPR180 TGDS
nsv826750	Chr.13:94706248 - 94715816 on Build GRCh38	Gain	SOX21 SOX21-AS1 LOC101927248
dgv3326n54	Chr.13:94711363 - 94713465 on Build GRCh38	Loss	SOX21 SOX21-AS1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

HMG box transcription factor

Gene Ontology Categories:

Process(es)

hair follicle development
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
stem cell differentiation

Function(s)

RNA polymerase II transcription factor activity, sequence-specific DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding