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See other NAGPA CNV Assays ›
Gene Symbol
NAGPA
Assay Reference Genome
Location

Chr.16:5025006 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00547513_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51172

Gene Name:

 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase

Gene Aliases:

 APAA, UCE

Location:

 Chr.16:5024844-5033941 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NAGPA NM_016256.3 10 2047 NP_057340.2
XM_011522517.2 10 1963 XP_011520819.1
AF052111.1 5 1126
AF187072.1 10 2020 AAF08273.1
AK025570.1 10 2046
AK026122.1 10 2023
AK092889.1 4 3150
AK127952.1 10 2041
BC012194.1 11 2139 AAH12194.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1042612 Chr.16:4965694 - 5150514 on Build GRCh38 Loss C16orf89 EEF2KMT NAGPA SEC14L5 ALG1 NAGPA-AS1
nsv428318 Chr.16:5011594 - 5374828 on Build GRCh38 Gain C16orf89 EEF2KMT NAGPA SEC14L5 ALG1 NAGPA-AS1 RBFOX1
esv3892762 Chr.16:4967386 - 5060625 on Build GRCh38 Gain C16orf89 NAGPA SEC14L5 NAGPA-AS1
esv3637714 Chr.16:4958035 - 5079276 on Build GRCh38 Gain C16orf89 NAGPA SEC14L5 ALG1 NAGPA-AS1
esv3637713 Chr.16:4957958 - 5307305 on Build GRCh38 Gain C16orf89 EEF2KMT NAGPA SEC14L5 ALG1 NAGPA-AS1 RBFOX1
esv25186 Chr.16:4858500 - 5142800 on Build GRCh38 Gain C16orf89 EEF2KMT NAGPA SEC14L5 ALG1 UBN1 NAGPA-AS1 PPL
esv2422516 Chr.16:4775920 - 5160979 on Build GRCh38 Deletion ROGDI C16orf89 EEF2KMT NAGPA SEC14L5 ALG1 SMIM22 UBN1 NAGPA-AS1 SEPT12 PPL GLYR1
nsv1046986 Chr.16:4049000 - 5555721 on Build GRCh38 Gain SRL NAGPA SEC14L5 TFAP4 LOC105371063 UBN1 DNAJA3 CORO7-PAM16 SEPT12 CORO7 RBFOX1 C16orf89 GLIS2 NMRAL1 NAGPA-AS1 PPL ANKS3 VASN ROGDI GLIS2-AS1 EEF2KMT MIR6769A PAM16 ALG1 SMIM22 CDIP1 UBALD1 LINC01569 GLYR1 ZNF500 MGRN1 C16orf71 HMOX2 NUDT16L1 C16orf96 ADCY9
esv34300 Chr.16:5005938 - 5322534 on Build GRCh38 Gain C16orf89 EEF2KMT NAGPA SEC14L5 ALG1 NAGPA-AS1 RBFOX1
nsv1038475 Chr.16:5004985 - 5310633 on Build GRCh38 Gain C16orf89 EEF2KMT NAGPA SEC14L5 ALG1 NAGPA-AS1 RBFOX1
nsv457360 Chr.16:4960912 - 5284683 on Build GRCh38 Loss C16orf89 EEF2KMT NAGPA SEC14L5 ALG1 NAGPA-AS1 RBFOX1
esv2760069 Chr.16:4922849 - 5374828 on Build GRCh38 Gain+Loss C16orf89 EEF2KMT NAGPA SEC14L5 ALG1 NAGPA-AS1 RBFOX1 PPL
nsv817715 Chr.16:5006294 - 5309352 on Build GRCh38 Gain C16orf89 EEF2KMT NAGPA SEC14L5 ALG1 NAGPA-AS1 RBFOX1
nsv1039432 Chr.16:5013335 - 5074451 on Build GRCh38 Loss C16orf89 NAGPA SEC14L5 ALG1 NAGPA-AS1

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