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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2046207 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00550295_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 2 321 NP_001305122.1
NM_001318194.1 NP_001305123.1
NM_002528.6 2 321 NP_002519.1
XM_017023253.1 2 324 XP_016878742.1
AB001575.1 2 285 BAA19413.1
BC000391.2 2 278 AAH00391.2
BC003014.1 2 278 AAH03014.1
BE900738.1 2 203
BG468617.1
HY057336.1 2 298
HY094895.1 2 324
U79718.1 2 318 AAB41534.1
U81285.1 2 283 AAC51136.1
Y09687.1 2 275 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TSR3 HBA2 TBL3 MIR3177 CLCN7 AMDHD2 RAB40C ERVK13-1 NDUFB10 DDX11L10 NTHL1 MIR940 SNHG19 LOC105371038 MLST8 RNPS1 STUB1 FLJ42627 MIR3677 SNHG9 LINC00254 CCDC154 ABCA3 E4F1 MIR6768 HS3ST6 CHTF18 MIR6859-4 LMF1 PTX4 LOC729652 MIR6511B1 RPS2 FAHD1 SNORA78 MIR3176 LOC101929280 CEMP1 ARHGDIG NPRL3 KCTD5 LOC105371045 METRN MAPK8IP3 MCRIP2 PRR25 PDPK1 LOC105371049 TBC1D24 MRPS34 MIR662 NPW BAIAP3 LOC100134368 DNASE1L2 LOC107987233 MIR5587 MPG AXIN1 TELO2 TMEM204 C1QTNF8 LOC652276 FBXL16 TSC2 NARFL CCNF PRR35 HAGH PKD1 POLR3K MIR1225 EME2 MSLN LUC7L HAGHL RHBDL1 ZNF598 MSRB1 NHLRC4 RGS11 CASKIN1 LOC105371047 SPSB3 WASIR2 METTL26 PRSS27 SSTR5-AS1 SNORA64 HBA1 TPSAB1 MRPL28 HBM NOXO1 ECI1 RPL23AP5 BRICD5 HBQ1 NTN3 HBZ FAM234A RPL3L C16orf91 RNF151 MIR3178 SNRNP25 UBE2I RHBDF1 LOC105371046 SNORA10 RPUSD1 RHOT2 IFT140 DECR2 RAB11FIP3 NUBP2 CAPN15 MIR4516 SOX8 TMEM8A LINC00235 CCDC78 MIR6767 JMJD8 LOC100287175 IGFALS GNPTG LOC107984876 HN1L WDR90 WFIKKN1 GNG13 SLC9A3R2 UNKL FAM173A MIR4717 TPSG1 TPSD1 SYNGR3 TRAF7 C16orf59 GFER PRSS29P TPSB2 LMF1-AS1 LOC106660606 SNORD60 CRAMP1 PDIA2 WDR24 SSTR5 CACNA1H ATP6V0C MIR3180-5 LOC105371184 RAB26 NME3 NME4 PIGQ PGP ABCA17P MEIOB
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss SYNGR3 ZNF598 TBL3 NTHL1 NPW GFER TSC2 NOXO1 SLC9A3R2
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion SNHG9 SYNGR3 TBL3 SNORA64 SNORA10 GFER TSC2 HS3ST6 NOXO1 PKD1 LOC105371049 MIR1225 NDUFB10 ZNF598 NTHL1 NPW MSRB1 RPL3L MIR6511B1 RPS2 RNF151 SNORA78 MIR4516 SLC9A3R2
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion SNHG9 SYNGR3 TBL3 SNORA64 SNORA10 GFER TSC2 NOXO1 PKD1 LOC105371049 MIR1225 NDUFB10 ZNF598 NTHL1 NPW MIR6511B1 RPS2 RNF151 SNORA78 SLC9A3R2

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