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See other AXIN1 CNV Assays ›
Gene Symbol
AXIN1
Assay Reference Genome
Location

Chr.16:289565 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00550548_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8312

Gene Name:

 axin 1

Gene Aliases:

 AXIN, PPP1R49

Location:

 Chr.16:287440-355226 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 15 - Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AXIN1 NM_003502.3 NP_003493.1
NM_181050.2 NP_851393.1
NR_134879.1
XM_011522682.2 XP_011520984.1
XM_011522683.2 XP_011520985.1
XM_011522684.2 XP_011520986.1
XM_011522686.1 XP_011520988.1
XM_017023743.1 XP_016879232.1
XM_017023744.1 XP_016879233.1
XM_017023745.1 XP_016879234.1
XM_017023746.1 XP_016879235.1
AB208876.1 7 5406 BAD92113.1
AF009674.1 AAC51624.1
BC017447.1 AAH17447.1
BC044648.1 AAH44648.1
BX648449.1 1 854
KF615847.1
KF615848.1
KF615849.1
KF615850.1
KF615851.1
KF615852.1
KF615853.1
KF615854.1
KU178413.1
KU178414.1
KU178415.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC105371049 NHLRC4 MIR1225 TSR3 CHTF18 TPSAB1 HBM PRSS27 PDIA2 MAPK8IP3 ERVK13-1 LOC729652 MIR4717 SNORA78 DNASE1L2 CCNF LOC105371045 MIR3677 TBC1D24 RPL3L SNHG19 TMEM8A MIR3176 MCRIP2 CRAMP1 TELO2 NME3 SOX8 FBXL16 HAGH RPL23AP5 MEIOB LOC100134368 AMDHD2 LOC105371046 LMF1 FAHD1 RAB26 SPSB3 LOC106660606 WASIR2 PRSS29P FLJ42627 RHOT2 ZNF598 IGFALS LOC105371047 PRR35 RPUSD1 METRN SNRNP25 CCDC78 WDR24 E4F1 MRPS34 RAB11FIP3 HBA1 WFIKKN1 NME4 MIR6859-4 PTX4 NDUFB10 LMF1-AS1 TMEM204 TRAF7 POLR3K NOXO1 HS3ST6 MIR5587 CASKIN1 MIR3180-5 GNPTG SNORA64 FAM173A RHBDF1 MIR4516 RNPS1 LOC105371038 MIR6511B1 LINC00254 JMJD8 RGS11 HBA2 MIR6767 HBQ1 ARHGDIG SSTR5-AS1 LOC100287175 TPSG1 PGP LOC107984876 GFER LOC105371184 CACNA1H HAGHL STUB1 C1QTNF8 RAB40C UBE2I CLCN7 NPRL3 ECI1 ABCA17P MLST8 RNF151 DDX11L10 PDPK1 DECR2 AXIN1 KCTD5 METTL26 BRICD5 SNORA10 TSC2 MSRB1 MSLN CCDC154 TBL3 GNG13 PIGQ MRPL28 ATP6V0C MPG SNHG9 NARFL TPSD1 MIR940 TPSB2 EME2 WDR90 LOC107987233 MIR3177 UNKL C16orf91 LOC101929280 RHBDL1 FAM234A LINC00235 SLC9A3R2 MIR662 MIR6768 BAIAP3 C16orf59 LUC7L SNORD60 MIR3178 CEMP1 HBZ NPW HN1L CAPN15 RPS2 LOC652276 SSTR5 PRR25 NUBP2 NTHL1 ABCA3 IFT140 SYNGR3 PKD1 NTN3
esv3637564 Chr.16:287941 - 370218 on Build GRCh38 Gain MRPL28 AXIN1
nsv952896 Chr.16:273501 - 321500 on Build GRCh38 Deletion RGS11 ARHGDIG PDIA2 AXIN1
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain FAM234A MRPL28 RAB11FIP3 LOC100134368 RGS11 TMEM8A NME4 ARHGDIG PDIA2 RPL23AP5 DECR2 AXIN1
nsv570951 Chr.16:279671 - 322597 on Build GRCh38 Loss ARHGDIG PDIA2 AXIN1
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain FAM234A RGS11 ARHGDIG PDIA2 AXIN1
nsv570947 Chr.16:272935 - 297326 on Build GRCh38 Loss RGS11 ARHGDIG PDIA2 AXIN1
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss FAM234A MRPL28 RAB11FIP3 LOC100134368 RGS11 TMEM8A NME4 ARHGDIG PDIA2 RPL23AP5 DECR2 AXIN1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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