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See other TCF25 CNV Assays ›
Gene Symbol
TCF25
Assay Reference Genome
Location

Chr.16:89893823 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00551047_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 22980

Gene Name:

 transcription factor 25

Gene Aliases:

 FKSG26, Hulp1, NULP1, PRO2620, hKIAA1049

Location:

 Chr.16:89873583-89911384 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TCF25 NM_014972.2 7 875 NP_055787.1
XM_005256297.2 7 869 XP_005256354.1
XM_005256298.2 7 869 XP_005256355.1
XM_005256299.2 7 869 XP_005256356.1
XM_011522956.2 7 869 XP_011521258.1
XM_011522957.2 7 869 XP_011521259.1
XM_011522958.2 7 869 XP_011521260.1
XM_011522959.2 6 803 XP_011521261.1
XM_011522960.2 7 869 XP_011521262.1
XM_011522961.2 8 1038 XP_011521263.1
XM_017023047.1 6 803 XP_016878536.1
XM_017023048.1 7 869 XP_016878537.1
XM_017023049.1 7 869 XP_016878538.1
XM_017023050.1 7 869 XP_016878539.1
XM_017023051.1 6 803 XP_016878540.1
XM_017023052.1 6 803 XP_016878541.1
XM_017023053.1 8 1476 XP_016878542.1
XM_017023054.1 8 1038 XP_016878543.1
XM_017023055.1 8 1038 XP_016878544.1
XM_017023056.1 8 1045 XP_016878545.1
XM_017023057.1 8 1476 XP_016878546.1
XM_017023058.1 7 1410 XP_016878547.1
AB028972.1 5 416 BAA83001.1
AF130092.1 4 377 AAG35518.1
AF322111.1 7 889 AAG50276.1
BC000959.1 7 798 AAH00959.1
BC009349.2 7 820 AAH09349.1
BC011884.2 7 849 AAH11884.1
DQ321703.1 7 889 ABC55265.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv457624 Chr.16:89738447 - 89915950 on Build GRCh38 Loss LOC107984817 SPIRE2 TCF25 ZNF276 LOC105371419 FANCA
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss CHMP1A TUBB3 CDK10 CENPBD1 LOC107984817 DPEP1 MC1R GAS8 TCF25 SPATA2L ZNF276 SPATA33 FANCA DBNDD1 DEF8 SPIRE2 AFG3L1P VPS9D1-AS1 LOC105371419 GAS8-AS1 VPS9D1
esv2758671 Chr.16:89804324 - 89901541 on Build GRCh38 Loss LOC107984817 SPIRE2 TCF25 LOC105371419 FANCA
nsv573810 Chr.16:89857498 - 90037251 on Build GRCh38 Loss DEF8 TUBB3 CENPBD1 MC1R SPIRE2 AFG3L1P GAS8 TCF25 GAS8-AS1 DBNDD1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss CHMP1A TUBB3 CDK10 CENPBD1 LOC107984817 DPEP1 MC1R SPG7 FAM157C GAS8 TCF25 SPATA2L FANCA DEF8 TUBB8P7 AFG3L1P CPNE7 VPS9D1-AS1 LOC101927817 URAHP LOC105371414 RPL13 LOC100287036 ZNF276 PRDM7 ZNF778 SPATA33 DBNDD1 SNORD68 SPIRE2 LOC105371419 GAS8-AS1 ANKRD11 VPS9D1
nsv573799 Chr.16:89852186 - 90022379 on Build GRCh38 Gain DEF8 TUBB3 CENPBD1 MC1R SPIRE2 AFG3L1P GAS8 TCF25 LOC105371419 DBNDD1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss TUBB3 LOC107984817 MC1R CTU2 FAM157C GAS8 TCF25 CBFA2T3 LOC101927793 LOC107987238 VPS9D1-AS1 ACSF3 LOC101927817 URAHP RPL13 ZNF276 SNAI3 PRDM7 ZNF778 GALNS SNORD68 SPIRE2 LOC105371419 ANKRD11 CHMP1A SNAI3-AS1 CDK10 CENPBD1 DPEP1 SPG7 SPATA2L PIEZO1 CYBA FANCA LOC100289580 DEF8 LOC105371409 TUBB8P7 LOC100129697 AFG3L1P CPNE7 APRT TRAPPC2L CDH15 IL17C SLC22A31 MIR4722 LOC105371414 LOC100287036 PABPN1L CDT1 SPATA33 DBNDD1 LOC400558 RNF166 LINC00304 GAS8-AS1 LOC339059 MVD VPS9D1
nsv1066499 Chr.16:89891957 - 90028891 on Build GRCh38 Loss DEF8 TUBB3 CENPBD1 MC1R AFG3L1P GAS8 TCF25 DBNDD1

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