Genomic Map
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Target Gene Details
Entrez Gene ID: | 770 |
Gene Name: | carbonic anhydrase 11 |
Gene Aliases: |
CARPX1 |
Location: |
Chr.19:48637942-48646312 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CA11 | NM_001217.4 | 1 | 585 | NP_001208.2 |
| NR_136241.1 | 1 | 585 | ||
| AB018195.1 | 1 | 273 | BAA36840.1 | |
| AF067662.1 | 1 | 269 | AAC99689.1 | |
| AY358967.1 | 1 | 490 | AAQ89326.1 | |
| BC002662.2 | AAH02662.1 | |||
| BX440526.2 | 1 | 585 |
Target Gene Details
Entrez Gene ID: | 653677 |
Gene Name: | secretory blood group 1, pseudogene |
Gene Aliases: |
SEC1 |
Location: |
Chr.19:48638039-48682245 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SEC1P | NR_004401.2 | |||
| AK301046.1 | ||||
| AK301238.1 | ||||
| D87946.1 | ||||
| D87947.1 | ||||
| DC353776.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
 PPFIA3
CARD8-AS1
BCAT2
FUZ
SNAR-A10
LOC101059948
ALDH16A1
MAMSTR
SNORD34
SNAR-A11
VRK3
FLT3LG
TULP2
CGB3
CD37
RUVBL2
NUCB1-AS1
AKT1S1
SNAR-A5
SNAR-G1
ZNF473
MIR150
MIR6799
SNAR-A4
GYS1
GRIN2D
SIGLEC11
SLC17A7
TSKS
SNAR-A12
MIR4324
NTN5
NUCB1
SYNGR4
SNAR-G2
IZUMO1
IL4I1
PRR12
MIR6800
MIR4749
SNAR-C4
PIH1D1
DKKL1
ATF5
GRWD1
SNORD32A
LOC105447645
FUT2
SNAR-A14
LMTK3
CARD8
MIR5088
SNAR-C2
KDELR1
SNAR-A13
SIGLEC16
LHB
SNAR-A8
CPT1C
DHDH
C19orf68
SCAF1
MIR4750
SNAR-A1
TBC1D17
RCN3
FTL
LIN7B
SNAR-C1
FUT1
PTOV1
SPHK2
PPP1R15A
SNAR-D
SLC6A16
KCNJ14
BSPH1
SNAR-A2
IRF3
SNAR-A6
SNORD35A
LOC105372430
PNKP
KCNA7
RRAS
PRRG2
ELSPBP1
BAX
FLJ26850
PLEKHA4
SULT2B1
BCL2L12
ADM5
DBP
RPS11
SNRNP70
RPL13A
PRMT1
SNAR-C3
PTOV1-AS1
FCGRT
SNAR-A3
CGB7
NOSIP
RPL18
MIR6798
SNAR-C5
MIR4751
HRC
LOC101928295
CGB1
ZNF114
AP2A1
FGF21
PTH2
GFY
CGB5
LOC100287477
LIG1
CCDC114
NTF4
SNAR-B1
SNAR-B2
NUP62
CCDC155
SPACA4
SNORD35B
C19orf73
CABP5
SEC1P
EMP3
RASIP1
TEAD2
SNAR-A9
PLA2G4C
FAM83E
MED25
CA11
HSD17B14
CGB2
SNAR-A7
TMEM143
PTOV1-AS2
SNORD33
PLA2G4C-AS1
TRPM4
CGB8
CYTH2
|
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Additional Information:
For this assay, SNP(s) [rs144709603] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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